Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 AC165349.2-201ENSMUST00000219097 426 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm5948-201ENSMUST00000219627 839 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 AC124196.1-201ENSMUST00000225970 1032 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 AC140208.1-201ENSMUST00000226609 285 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 mt-Tr-201ENSMUST00000082412 68 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm4849-201ENSMUST00000188428 2246 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 AC101875.1-201ENSMUST00000222666 2223 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Mrpl48-201ENSMUST00000064334 1865 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm36938-201ENSMUST00000191612 2696 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm18359-201ENSMUST00000173024 1459 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm24071-201ENSMUST00000104520 132 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Btnl10-203ENSMUST00000108818 1028 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm13243-201ENSMUST00000117481 565 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm14036-201ENSMUST00000118248 480 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm13240-201ENSMUST00000120042 565 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm14749-201ENSMUST00000121269 333 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm24960-201ENSMUST00000157923 90 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm2951-201ENSMUST00000169447 490 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm2930-201ENSMUST00000170403 474 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Rab26os-201ENSMUST00000176215 477 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm4451-201ENSMUST00000186000 1891 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm29126-201ENSMUST00000188686 151 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm26413-202ENSMUST00000198972 127 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm43198-201ENSMUST00000200927 326 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm18599-201ENSMUST00000206729 1125 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Btnl10-201ENSMUST00000020792 1028 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 AC145736.1-201ENSMUST00000214661 479 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 CT030124.1-201ENSMUST00000217130 235 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 AC154184.2-201ENSMUST00000225335 349 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 AC130219.2-201ENSMUST00000228765 807 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Olfr888-201ENSMUST00000075228 945 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm22971-201ENSMUST00000083305 97 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm42847-201ENSMUST00000201732 2553 ntBASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trim47Q8C0E3 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Trim47Q8C0E3 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC8.84□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms