Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Trp63-203ENSMUST00000115304 2634 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm6755-201ENSMUST00000100598 864 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm6740-201ENSMUST00000100617 864 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Etfbkmt-202ENSMUST00000111547 1250 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm14558-201ENSMUST00000117458 381 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm13002-201ENSMUST00000119286 682 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm15490-201ENSMUST00000119894 387 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm15763-201ENSMUST00000120136 403 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm23901-201ENSMUST00000157570 107 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm5561-201ENSMUST00000178932 480 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm3534-201ENSMUST00000182522 1001 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm37559-201ENSMUST00000193556 832 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm20162-201ENSMUST00000193629 871 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm33707-201ENSMUST00000195135 569 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC9.82□□□□□ -0.84
Trim35Q8C006 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm2734-201ENSMUST00000208561 743 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC9.82□□□□□ -0.84
Trim35Q8C006 AC166165.1-201ENSMUST00000214352 874 ntTSL 5 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC9.82□□□□□ -0.84
Trim35Q8C006 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trim35Q8C006 AC124555.1-201ENSMUST00000227051 880 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 AC123533.3-201ENSMUST00000228056 454 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 AC155270.1-201ENSMUST00000221626 4028 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Sept11-207ENSMUST00000202217 1380 ntTSL 5 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Nt5c1b-203ENSMUST00000143739 1570 ntTSL 2 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Etfbkmt-201ENSMUST00000047531 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Mfap3l-201ENSMUST00000034066 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Gpr85-202ENSMUST00000115491 2165 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Cyp1a1-202ENSMUST00000216433 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Stx16-202ENSMUST00000087908 3865 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Drosha-201ENSMUST00000090292 4519 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Ppp6c-201ENSMUST00000028087 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Trim2-201ENSMUST00000054990 3816 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Cdh18-203ENSMUST00000164787 2744 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Sptan1-208ENSMUST00000129241 7585 ntTSL 5 BASIC9.82□□□□□ -0.84
Trim35Q8C006 AC115047.2-201ENSMUST00000214421 1848 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Wdr25-201ENSMUST00000047115 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Hdac7-203ENSMUST00000116408 4226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Arhgap26-216ENSMUST00000155576 2280 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Pnpla1-202ENSMUST00000114737 4483 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Pnpla1-201ENSMUST00000056866 4483 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Slc28a1-201ENSMUST00000026820 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm8188-201ENSMUST00000219737 1690 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 Csf1r-201ENSMUST00000025523 3870 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Nmnat1-202ENSMUST00000105693 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Mia3-202ENSMUST00000109158 2961 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm13890-201ENSMUST00000117578 390 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm14529-201ENSMUST00000117894 406 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm11676-201ENSMUST00000120443 490 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm14926-201ENSMUST00000120650 508 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC9.81□□□□□ -0.84
Trim35Q8C006 1700049E15Rik-202ENSMUST00000152737 921 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm25591-201ENSMUST00000177317 94 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 Mir7088-201ENSMUST00000184227 86 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm18117-201ENSMUST00000187720 742 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm43812-202ENSMUST00000202701 581 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm44204-201ENSMUST00000204722 737 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm45439-201ENSMUST00000211723 359 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm3266-201ENSMUST00000217832 591 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 AI463170-201ENSMUST00000217839 970 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 AC124465.1-201ENSMUST00000222349 746 ntTSL 3 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trim35Q8C006 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Armcx5-201ENSMUST00000096321 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Cep63-206ENSMUST00000162655 4180 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Gm10033-201ENSMUST00000072427 1813 ntBASIC9.81□□□□□ -0.84
Trim35Q8C006 Gpr68-203ENSMUST00000110066 3223 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms