Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
Usp47Q8BY87 Gm10568-201ENSMUST00000193244 1634 ntBASIC9.96□□□□□ -0.81
Usp47Q8BY87 Gm45407-201ENSMUST00000209499 3676 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Usp47Q8BY87 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Usp47Q8BY87 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Usp47Q8BY87 Gm14865-201ENSMUST00000117523 494 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 Gm9311-201ENSMUST00000118042 1269 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 Gm14612-201ENSMUST00000121522 881 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 Gm7289-201ENSMUST00000168993 734 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 Gm22642-201ENSMUST00000175352 252 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.82
Usp47Q8BY87 Gm8192-201ENSMUST00000182196 958 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Usp47Q8BY87 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Usp47Q8BY87 Gm18430-201ENSMUST00000197534 682 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 Gm20223-201ENSMUST00000199932 805 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 AC124184.1-201ENSMUST00000218167 283 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 Gm9267-201ENSMUST00000222831 404 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Usp47Q8BY87 Gm24036-201ENSMUST00000082868 156 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Usp47Q8BY87 Gm8276-201ENSMUST00000192231 1812 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 Gm12187-201ENSMUST00000119584 1375 ntBASIC9.96□□□□□ -0.82
Usp47Q8BY87 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC9.96□□□□□ -0.82
Usp47Q8BY87 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC9.96□□□□□ -0.82
Usp47Q8BY87 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Usp47Q8BY87 CT010514.1-201ENSMUST00000214088 2969 ntBASIC9.95□□□□□ -0.82
Usp47Q8BY87 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC9.95□□□□□ -0.82
Usp47Q8BY87 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC9.95□□□□□ -0.82
Usp47Q8BY87 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 AC159264.1-202ENSMUST00000224856 3162 ntBASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm2178-201ENSMUST00000104927 357 ntBASIC9.95□□□□□ -0.82
Usp47Q8BY87 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm8312-201ENSMUST00000119380 618 ntBASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm15242-201ENSMUST00000122459 283 ntBASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm25395-201ENSMUST00000157343 272 ntBASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm29141-201ENSMUST00000190357 882 ntBASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm37620-201ENSMUST00000192910 501 ntBASIC9.95□□□□□ -0.82
Usp47Q8BY87 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm37790-201ENSMUST00000193136 3346 ntBASIC9.95□□□□□ -0.82
Usp47Q8BY87 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC9.95□□□□□ -0.82
Usp47Q8BY87 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Usp47Q8BY87 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp47Q8BY87 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC9.94□□□□□ -0.82
Usp47Q8BY87 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Usp47Q8BY87 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp47Q8BY87 Gm36933-201ENSMUST00000194945 3071 ntBASIC9.94□□□□□ -0.82
Usp47Q8BY87 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Usp47Q8BY87 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp47Q8BY87 Gm37924-201ENSMUST00000195470 3647 ntBASIC9.94□□□□□ -0.82
Usp47Q8BY87 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Usp47Q8BY87 Gm5166-201ENSMUST00000121332 573 ntBASIC9.94□□□□□ -0.82
Usp47Q8BY87 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
Usp47Q8BY87 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp47Q8BY87 Mir5617-201ENSMUST00000176786 57 ntBASIC9.94□□□□□ -0.82
Usp47Q8BY87 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC9.94□□□□□ -0.82
Usp47Q8BY87 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp47Q8BY87 Gm17822-201ENSMUST00000204307 351 ntBASIC9.94□□□□□ -0.82
Usp47Q8BY87 Gm3678-201ENSMUST00000218888 492 ntBASIC9.94□□□□□ -0.82
Usp47Q8BY87 AL713985.1-201ENSMUST00000219030 420 ntBASIC9.94□□□□□ -0.82
Usp47Q8BY87 AC150661.1-201ENSMUST00000222563 495 ntBASIC9.94□□□□□ -0.82
Usp47Q8BY87 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC9.94□□□□□ -0.82
Usp47Q8BY87 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp47Q8BY87 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 162.5 ms