Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm2325-201ENSMUST00000186637 581 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gm6137-201ENSMUST00000187552 578 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gm37203-201ENSMUST00000191618 385 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 AW822073-201ENSMUST00000075305 555 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Tgm4-201ENSMUST00000026893 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gm38288-201ENSMUST00000195330 1320 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gbp8-201ENSMUST00000031235 2459 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 AC159301.1-202ENSMUST00000225860 2133 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gm7882-201ENSMUST00000177915 1762 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gm3943-201ENSMUST00000118606 718 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gm24719-201ENSMUST00000157520 110 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gm18467-201ENSMUST00000208805 434 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 AV026068-216ENSMUST00000223874 328 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 AV026068-218ENSMUST00000223980 575 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gm43311-201ENSMUST00000200016 2377 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.62□□□□□ -1.35
Spg11Q3UHA3 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 G430049J08Rik-201ENSMUST00000179907 2686 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Spg11Q3UHA3 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm13940-201ENSMUST00000121023 301 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm29519-201ENSMUST00000186994 398 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm19231-201ENSMUST00000193212 830 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm6063-201ENSMUST00000206958 485 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Ednra-201ENSMUST00000034029 3625 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm45767-201ENSMUST00000212778 4561 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm43571-201ENSMUST00000200067 3098 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gtf2a1-201ENSMUST00000021345 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm26289-201ENSMUST00000104169 131 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm25346-201ENSMUST00000104509 128 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm27299-201ENSMUST00000184593 103 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm37358-201ENSMUST00000195492 479 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm43287-201ENSMUST00000197747 600 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm43867-201ENSMUST00000203860 525 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm44239-201ENSMUST00000204228 271 ntBASIC6.61□□□□□ -1.35
Spg11Q3UHA3 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Spg11Q3UHA3 Gm18943-201ENSMUST00000207357 1216 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms