Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ctdnep1Q3TP92 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Ctdnep1Q3TP92 AC162301.1-201ENSMUST00000228785 1542 ntBASIC8.06□□□□□ -1.12
Ctdnep1Q3TP92 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC8.06□□□□□ -1.12
Ctdnep1Q3TP92 Gm43339-201ENSMUST00000200032 1606 ntBASIC8.06□□□□□ -1.12
Ctdnep1Q3TP92 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ctdnep1Q3TP92 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
Ctdnep1Q3TP92 Gm18908-201ENSMUST00000207125 1483 ntBASIC8.06□□□□□ -1.12
Ctdnep1Q3TP92 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ctdnep1Q3TP92 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Gm15105-201ENSMUST00000117777 204 ntBASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Gm16357-201ENSMUST00000144091 474 ntBASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Gm17022-201ENSMUST00000166415 922 ntBASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Gm30517-201ENSMUST00000197350 772 ntBASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Gm18112-201ENSMUST00000219862 1195 ntBASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 AC127242.3-201ENSMUST00000222009 580 ntBASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 AC165157.1-201ENSMUST00000222981 580 ntBASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ctdnep1Q3TP92 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 AC154597.1-201ENSMUST00000224095 2713 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 AC139941.2-201ENSMUST00000221565 1824 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm25379-201ENSMUST00000104338 114 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm6743-201ENSMUST00000117345 1066 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm13260-201ENSMUST00000117797 1264 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm13237-201ENSMUST00000122151 635 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm26179-201ENSMUST00000177723 132 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm4956-202ENSMUST00000178869 672 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm4308-201ENSMUST00000179735 914 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm26528-201ENSMUST00000181965 283 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm43108-201ENSMUST00000200525 293 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm44380-201ENSMUST00000203125 293 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm2221-201ENSMUST00000209342 418 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 AC150661.1-201ENSMUST00000222563 495 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 AC124489.1-201ENSMUST00000225852 526 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Gm43421-201ENSMUST00000200044 2905 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 AC129308.2-203ENSMUST00000224109 2385 ntBASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ctdnep1Q3TP92 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ctdnep1Q3TP92 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ctdnep1Q3TP92 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Ctdnep1Q3TP92 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ctdnep1Q3TP92 Gm29761-201ENSMUST00000215964 1939 ntBASIC8.03□□□□□ -1.12
Ctdnep1Q3TP92 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ctdnep1Q3TP92 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.03□□□□□ -1.12
Ctdnep1Q3TP92 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Ctdnep1Q3TP92 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms