Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm13038-201ENSMUST00000119886 459 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm15160-201ENSMUST00000120553 907 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm15501-202ENSMUST00000140687 625 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm8192-201ENSMUST00000182196 958 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm37225-201ENSMUST00000193423 325 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm43108-201ENSMUST00000200525 293 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm44380-201ENSMUST00000203125 293 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 AC102582.1-201ENSMUST00000215376 378 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 AC159205.1-201ENSMUST00000225513 1099 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Trim43aQ3TL54 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm22152-201ENSMUST00000116966 125 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm4911-201ENSMUST00000119388 945 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm11796-201ENSMUST00000120208 972 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm15481-201ENSMUST00000120264 539 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm25437-201ENSMUST00000158282 132 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Mir5100-201ENSMUST00000174993 64 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm21181-201ENSMUST00000186249 330 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm28573-201ENSMUST00000187821 380 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms