Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm649-201ENSMUST00000117284 1054 ntBASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm14480-201ENSMUST00000118521 433 ntBASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm5759-201ENSMUST00000119203 811 ntBASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm23392-201ENSMUST00000157580 113 ntBASIC6.29□□□□□ -1.4
Sec61a1P61620 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm17047-201ENSMUST00000167709 430 ntBASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm27972-201ENSMUST00000184720 137 ntBASIC6.29□□□□□ -1.4
Sec61a1P61620 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sec61a1P61620 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sec61a1P61620 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm4785-201ENSMUST00000191025 751 ntBASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm37724-201ENSMUST00000195240 1221 ntBASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC6.29□□□□□ -1.4
Sec61a1P61620 Gm42424-201ENSMUST00000198319 376 ntBASIC6.29□□□□□ -1.4
Sec61a1P61620 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sec61a1P61620 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.29□□□□□ -1.4
Sec61a1P61620 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.29□□□□□ -1.4
Sec61a1P61620 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.29□□□□□ -1.4
Sec61a1P61620 AC166822.1-201ENSMUST00000227667 636 ntBASIC6.29□□□□□ -1.4
Sec61a1P61620 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sec61a1P61620 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sec61a1P61620 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sec61a1P61620 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sec61a1P61620 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a1P61620 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sec61a1P61620 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a1P61620 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a1P61620 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sec61a1P61620 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm15576-201ENSMUST00000117806 583 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm14465-201ENSMUST00000120603 567 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm25164-201ENSMUST00000158908 116 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm5300-201ENSMUST00000182201 1003 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm28894-201ENSMUST00000185214 615 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm37369-201ENSMUST00000194179 615 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm43212-201ENSMUST00000198208 394 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.28□□□□□ -1.4
Sec61a1P61620 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm45072-201ENSMUST00000208673 929 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 AC163296.1-202ENSMUST00000218395 661 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC6.28□□□□□ -1.4
Sec61a1P61620 AC163296.1-201ENSMUST00000220004 1266 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm18503-201ENSMUST00000220340 728 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm25926-201ENSMUST00000082899 160 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.28□□□□□ -1.4
Sec61a1P61620 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.28□□□□□ -1.4
Sec61a1P61620 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms