Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 n-R5s95-201ENSMUST00000082684 118 ntBASIC9.05□□□□□ -0.96
Msh6P54276 Gm22684-201ENSMUST00000082849 132 ntBASIC9.05□□□□□ -0.96
Msh6P54276 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Msh6P54276 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Msh6P54276 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Msh6P54276 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC9.05□□□□□ -0.96
Msh6P54276 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Msh6P54276 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC9.05□□□□□ -0.96
Msh6P54276 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Msh6P54276 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC9.05□□□□□ -0.96
Msh6P54276 CT009757.4-201ENSMUST00000221520 2541 ntBASIC9.05□□□□□ -0.96
Msh6P54276 Gm42679-201ENSMUST00000197086 2906 ntBASIC9.05□□□□□ -0.96
Msh6P54276 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Msh6P54276 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC9.04□□□□□ -0.96
Msh6P54276 Gm13821-201ENSMUST00000202029 3201 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Msh6P54276 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Msh6P54276 Gm45537-201ENSMUST00000211539 2708 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC9.04□□□□□ -0.96
Msh6P54276 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Msh6P54276 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Msh6P54276 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Msh6P54276 Gm15310-201ENSMUST00000117891 372 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Gm13176-201ENSMUST00000117910 477 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Gm11796-201ENSMUST00000120208 972 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Gm14612-201ENSMUST00000121522 881 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC9.04□□□□□ -0.96
Msh6P54276 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Msh6P54276 Gm9672-201ENSMUST00000166437 425 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Gm7426-201ENSMUST00000179046 404 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Gm27602-201ENSMUST00000183861 111 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Gm27804-201ENSMUST00000185135 119 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Gm18699-201ENSMUST00000190713 243 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Gm37439-201ENSMUST00000193150 856 ntBASIC9.04□□□□□ -0.96
Msh6P54276 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Msh6P54276 Gm43212-201ENSMUST00000198208 394 ntBASIC9.04□□□□□ -0.96
Msh6P54276 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC9.04□□□□□ -0.96
Msh6P54276 Gm34424-201ENSMUST00000213400 782 ntBASIC9.04□□□□□ -0.96
Msh6P54276 AC165349.1-201ENSMUST00000217896 424 ntBASIC9.04□□□□□ -0.96
Msh6P54276 AC166574.3-201ENSMUST00000226725 367 ntBASIC9.04□□□□□ -0.96
Msh6P54276 AC135086.1-201ENSMUST00000228621 817 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Msh6P54276 Mir106b-201ENSMUST00000083580 82 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Gm43681-201ENSMUST00000201581 1903 ntBASIC9.04□□□□□ -0.96
Msh6P54276 AC117608.1-201ENSMUST00000225500 3418 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Msh6P54276 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
Msh6P54276 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
Msh6P54276 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Msh6P54276 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Msh6P54276 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Msh6P54276 Gm15681-201ENSMUST00000137501 2704 ntBASIC9.04□□□□□ -0.96
Msh6P54276 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Msh6P54276 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Msh6P54276 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC9.04□□□□□ -0.96
Msh6P54276 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Msh6P54276 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Msh6P54276 AC171003.1-201ENSMUST00000221667 1665 ntBASIC9.03□□□□□ -0.96
Msh6P54276 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Gm9874-202ENSMUST00000194957 1464 ntBASIC9.03□□□□□ -0.96
Msh6P54276 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Gm22953-201ENSMUST00000116724 101 ntBASIC9.03□□□□□ -0.96
Msh6P54276 Gm12439-201ENSMUST00000117162 365 ntBASIC9.03□□□□□ -0.96
Msh6P54276 Gm14741-201ENSMUST00000120777 1009 ntBASIC9.03□□□□□ -0.96
Msh6P54276 Gm12140-201ENSMUST00000121214 544 ntBASIC9.03□□□□□ -0.96
Msh6P54276 Gm23430-201ENSMUST00000122490 314 ntBASIC9.03□□□□□ -0.96
Msh6P54276 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC9.03□□□□□ -0.96
Msh6P54276 Gm22262-201ENSMUST00000158713 86 ntBASIC9.03□□□□□ -0.96
Msh6P54276 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC9.03□□□□□ -0.96
Msh6P54276 Gm29141-201ENSMUST00000190357 882 ntBASIC9.03□□□□□ -0.96
Msh6P54276 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC9.03□□□□□ -0.96
Msh6P54276 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 CT009728.1-201ENSMUST00000225228 1050 ntBASIC9.03□□□□□ -0.96
Msh6P54276 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Msh6P54276 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Msh6P54276 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Msh6P54276 Zfp865-202ENSMUST00000076791 1129 ntBASIC9.03□□□□□ -0.96
Msh6P54276 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Gm24451-201ENSMUST00000083353 133 ntBASIC9.03□□□□□ -0.96
Msh6P54276 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
Msh6P54276 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC9.03□□□□□ -0.96
Msh6P54276 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Msh6P54276 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms