Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm43689-201ENSMUST00000195951 427 ntBASIC6.89□□□□□ -1.31
Sox3P53784 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.89□□□□□ -1.31
Sox3P53784 Gm44971-201ENSMUST00000206192 337 ntBASIC6.89□□□□□ -1.31
Sox3P53784 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.89□□□□□ -1.31
Sox3P53784 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.89□□□□□ -1.31
Sox3P53784 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox3P53784 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.89□□□□□ -1.31
Sox3P53784 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox3P53784 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox3P53784 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox3P53784 AC166159.1-201ENSMUST00000227154 1380 ntBASIC6.89□□□□□ -1.31
Sox3P53784 Gm28649-201ENSMUST00000189153 1581 ntBASIC6.89□□□□□ -1.31
Sox3P53784 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox3P53784 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox3P53784 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox3P53784 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Sox3P53784 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.89□□□□□ -1.31
Sox3P53784 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox3P53784 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox3P53784 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox3P53784 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox3P53784 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox3P53784 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox3P53784 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Sox3P53784 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Sox3P53784 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Sox3P53784 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Sox3P53784 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Sox3P53784 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox3P53784 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox3P53784 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox3P53784 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox3P53784 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox3P53784 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox3P53784 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox3P53784 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Sox3P53784 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox3P53784 Gm22370-201ENSMUST00000102422 83 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Sox3P53784 Gm11858-201ENSMUST00000117935 838 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Gm12451-201ENSMUST00000121636 633 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.88□□□□□ -1.31
Sox3P53784 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox3P53784 Gm4660-201ENSMUST00000131499 403 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC6.88□□□□□ -1.31
Sox3P53784 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.88□□□□□ -1.31
Sox3P53784 Gm26357-201ENSMUST00000158218 115 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Gm10177-201ENSMUST00000160052 444 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC6.88□□□□□ -1.31
Sox3P53784 Mir5110-201ENSMUST00000175537 87 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Gm23139-201ENSMUST00000179454 132 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC6.88□□□□□ -1.31
Sox3P53784 Mir6971-201ENSMUST00000183497 63 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox3P53784 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox3P53784 Gm43546-201ENSMUST00000196721 943 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Gm42782-201ENSMUST00000197286 522 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Gm42713-201ENSMUST00000202709 945 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Gm44245-201ENSMUST00000204304 232 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Gm45136-201ENSMUST00000205793 943 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Gm44833-201ENSMUST00000208368 331 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC6.88□□□□□ -1.31
Sox3P53784 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.88□□□□□ -1.31
Sox3P53784 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.88□□□□□ -1.31
Sox3P53784 AC164294.1-201ENSMUST00000224682 688 ntBASIC6.88□□□□□ -1.31
Sox3P53784 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.88□□□□□ -1.31
Sox3P53784 AC134414.1-201ENSMUST00000228499 1221 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Sox3P53784 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox3P53784 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox3P53784 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox3P53784 Gm5446-201ENSMUST00000091762 784 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox3P53784 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox3P53784 Gm44022-201ENSMUST00000203708 5429 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Sox3P53784 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox3P53784 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox3P53784 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox3P53784 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Sox3P53784 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Sox3P53784 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.88□□□□□ -1.31
Sox3P53784 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox3P53784 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox3P53784 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.87□□□□□ -1.31
Sox3P53784 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox3P53784 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox3P53784 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox3P53784 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox3P53784 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox3P53784 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox3P53784 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Sox3P53784 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Sox3P53784 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox3P53784 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms