Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.22□□□□□ -1.25
HttP42859 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.22□□□□□ -1.25
HttP42859 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.22□□□□□ -1.25
HttP42859 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.22□□□□□ -1.25
HttP42859 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.22□□□□□ -1.25
HttP42859 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.22□□□□□ -1.25
HttP42859 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.25
HttP42859 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
HttP42859 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
HttP42859 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
HttP42859 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
HttP42859 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
HttP42859 Gm25795-201ENSMUST00000104421 132 ntBASIC7.21□□□□□ -1.25
HttP42859 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
HttP42859 Gm9064-201ENSMUST00000163579 566 ntBASIC7.21□□□□□ -1.25
HttP42859 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
HttP42859 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
HttP42859 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
HttP42859 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.25
HttP42859 Ttc39b-203ENSMUST00000102823 8831 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
HttP42859 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
HttP42859 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
HttP42859 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
HttP42859 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HttP42859 AC123629.1-201ENSMUST00000225669 1364 ntBASIC7.21□□□□□ -1.26
HttP42859 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HttP42859 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.21□□□□□ -1.26
HttP42859 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
HttP42859 Gm11504-201ENSMUST00000120211 173 ntBASIC7.21□□□□□ -1.26
HttP42859 Gm12685-201ENSMUST00000121702 214 ntBASIC7.21□□□□□ -1.26
HttP42859 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
HttP42859 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.21□□□□□ -1.26
HttP42859 Gm22548-201ENSMUST00000174899 78 ntBASIC7.21□□□□□ -1.26
HttP42859 Mir3110-201ENSMUST00000175053 80 ntBASIC7.21□□□□□ -1.26
HttP42859 Gm1972-201ENSMUST00000181606 964 ntBASIC7.21□□□□□ -1.26
HttP42859 Gm44471-201ENSMUST00000197963 100 ntBASIC7.21□□□□□ -1.26
HttP42859 Gm7570-201ENSMUST00000215246 698 ntBASIC7.21□□□□□ -1.26
HttP42859 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.21□□□□□ -1.26
HttP42859 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC7.21□□□□□ -1.26
HttP42859 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HttP42859 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
HttP42859 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
HttP42859 Gm43169-201ENSMUST00000199544 4734 ntBASIC7.21□□□□□ -1.26
HttP42859 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HttP42859 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
HttP42859 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HttP42859 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HttP42859 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HttP42859 Gm11894-201ENSMUST00000121579 328 ntBASIC7.21□□□□□ -1.26
HttP42859 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.21□□□□□ -1.26
HttP42859 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC7.21□□□□□ -1.26
HttP42859 Gm19189-201ENSMUST00000221689 754 ntBASIC7.21□□□□□ -1.26
HttP42859 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.21□□□□□ -1.26
HttP42859 Gm24454-201ENSMUST00000083349 132 ntBASIC7.21□□□□□ -1.26
HttP42859 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
HttP42859 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
HttP42859 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
HttP42859 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
HttP42859 Gm15229-201ENSMUST00000146636 1398 ntBASIC7.2□□□□□ -1.26
HttP42859 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 Gm13537-201ENSMUST00000120467 267 ntBASIC7.2□□□□□ -1.26
HttP42859 Gm15120-201ENSMUST00000120602 301 ntBASIC7.2□□□□□ -1.26
HttP42859 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC7.2□□□□□ -1.26
HttP42859 Gm26037-201ENSMUST00000158150 311 ntBASIC7.2□□□□□ -1.26
HttP42859 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC7.2□□□□□ -1.26
HttP42859 Gm38384-201ENSMUST00000195413 1122 ntBASIC7.2□□□□□ -1.26
HttP42859 Gm18430-201ENSMUST00000197534 682 ntBASIC7.2□□□□□ -1.26
HttP42859 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC7.2□□□□□ -1.26
HttP42859 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.2□□□□□ -1.26
HttP42859 AC151971.3-201ENSMUST00000214694 404 ntBASIC7.2□□□□□ -1.26
HttP42859 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC7.2□□□□□ -1.26
HttP42859 AC166105.1-201ENSMUST00000227512 482 ntBASIC7.2□□□□□ -1.26
HttP42859 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
HttP42859 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 Gm8049-201ENSMUST00000214336 1782 ntBASIC7.2□□□□□ -1.26
HttP42859 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
HttP42859 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
HttP42859 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
HttP42859 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC7.2□□□□□ -1.26
HttP42859 Gm15233-201ENSMUST00000118747 400 ntBASIC7.2□□□□□ -1.26
HttP42859 Gm12447-201ENSMUST00000119110 470 ntBASIC7.2□□□□□ -1.26
HttP42859 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
HttP42859 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
HttP42859 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
HttP42859 AC154452.1-201ENSMUST00000225819 241 ntBASIC7.2□□□□□ -1.26
HttP42859 n-R5s173-201ENSMUST00000082620 119 ntBASIC7.2□□□□□ -1.26
HttP42859 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms