Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.35□□□□□ -1.07
Traf1P39428 AC154747.4-203ENSMUST00000225893 1384 ntBASIC8.35□□□□□ -1.07
Traf1P39428 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Traf1P39428 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC8.34□□□□□ -1.07
Traf1P39428 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Traf1P39428 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 Gm10388-201ENSMUST00000205001 2936 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Traf1P39428 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Traf1P39428 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Gm13724-201ENSMUST00000122395 1155 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.34□□□□□ -1.07
Traf1P39428 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC8.34□□□□□ -1.07
Traf1P39428 Gm25505-201ENSMUST00000157220 246 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Traf1P39428 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Gm26528-201ENSMUST00000181965 283 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Gm28952-201ENSMUST00000189285 681 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC8.34□□□□□ -1.07
Traf1P39428 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.34□□□□□ -1.07
Traf1P39428 Gm35108-201ENSMUST00000194321 699 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC8.34□□□□□ -1.07
Traf1P39428 Gm33191-201ENSMUST00000195604 699 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC8.34□□□□□ -1.07
Traf1P39428 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.34□□□□□ -1.07
Traf1P39428 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC8.34□□□□□ -1.07
Traf1P39428 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Traf1P39428 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Traf1P39428 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Traf1P39428 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 Gm37730-201ENSMUST00000192432 2211 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Traf1P39428 Gm42549-201ENSMUST00000202392 7004 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Gm37530-201ENSMUST00000191759 4932 ntBASIC8.34□□□□□ -1.07
Traf1P39428 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.34□□□□□ -1.07
Traf1P39428 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Traf1P39428 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Traf1P39428 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm21781-201ENSMUST00000178920 4838 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.33□□□□□ -1.08
Traf1P39428 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Traf1P39428 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 AC125487.2-201ENSMUST00000219810 1300 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Traf1P39428 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Traf1P39428 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Traf1P39428 Gm22707-201ENSMUST00000103834 110 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm22438-201ENSMUST00000104049 132 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm24869-201ENSMUST00000104072 128 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm22671-201ENSMUST00000104420 134 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Traf1P39428 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC8.33□□□□□ -1.08
Traf1P39428 Gm13260-201ENSMUST00000117797 1264 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm11858-201ENSMUST00000117935 838 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm14869-201ENSMUST00000119007 884 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.33□□□□□ -1.08
Traf1P39428 Gm9439-201ENSMUST00000119554 973 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm7571-201ENSMUST00000120252 927 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm13940-201ENSMUST00000121023 301 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm15316-201ENSMUST00000121082 421 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm2735-201ENSMUST00000136133 277 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm16357-201ENSMUST00000144091 474 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm26321-201ENSMUST00000157740 242 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm24680-201ENSMUST00000158759 126 ntBASIC8.33□□□□□ -1.08
Traf1P39428 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms