Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Rom1P32958 Gm45174-201ENSMUST00000208884 3065 ntBASIC5.59□□□□□ -1.52
Rom1P32958 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Rom1P32958 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Rom1P32958 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Rom1P32958 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Rom1P32958 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC5.58□□□□□ -1.52
Rom1P32958 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Mir678-201ENSMUST00000102114 84 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Gm24462-201ENSMUST00000102430 106 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Gm13878-201ENSMUST00000117986 577 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Gm13930-201ENSMUST00000118569 368 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Gm5319-201ENSMUST00000118965 873 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Gm16407-201ENSMUST00000122134 567 ntBASIC5.58□□□□□ -1.52
Rom1P32958 n-R5s30-201ENSMUST00000122624 122 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC5.58□□□□□ -1.52
Rom1P32958 H2afy3-201ENSMUST00000151919 1112 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Gm22811-201ENSMUST00000157468 154 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Rom1P32958 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.58□□□□□ -1.52
Rom1P32958 Gm5205-201ENSMUST00000182253 1003 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Gm7734-201ENSMUST00000182832 1011 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC5.58□□□□□ -1.52
Rom1P32958 Gm44306-201ENSMUST00000203058 203 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC5.58□□□□□ -1.52
Rom1P32958 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC5.58□□□□□ -1.52
Rom1P32958 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC5.58□□□□□ -1.52
Rom1P32958 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC5.58□□□□□ -1.52
Rom1P32958 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.58□□□□□ -1.52
Rom1P32958 AC130673.1-201ENSMUST00000227992 435 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Rom1P32958 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Rom1P32958 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Rom1P32958 Gm17541-201ENSMUST00000080062 525 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Gm24405-201ENSMUST00000083033 167 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Mir135b-201ENSMUST00000083501 97 ntBASIC5.58□□□□□ -1.52
Rom1P32958 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Rom1P32958 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC5.58□□□□□ -1.52
Rom1P32958 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Gm42763-201ENSMUST00000199595 2087 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC5.58□□□□□ -1.52
Rom1P32958 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Amy2b-201ENSMUST00000120184 1577 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Rom1P32958 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rom1P32958 Gm37730-201ENSMUST00000192432 2211 ntBASIC5.58□□□□□ -1.52
Rom1P32958 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Rom1P32958 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rom1P32958 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.57□□□□□ -1.52
Rom1P32958 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rom1P32958 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Rom1P32958 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Rom1P32958 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rom1P32958 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rom1P32958 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Rom1P32958 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rom1P32958 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Rom1P32958 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Rom1P32958 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rom1P32958 Gm8836-201ENSMUST00000198196 1348 ntBASIC5.57□□□□□ -1.52
Rom1P32958 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.57□□□□□ -1.52
Rom1P32958 Gm37067-201ENSMUST00000195730 1628 ntBASIC5.57□□□□□ -1.52
Rom1P32958 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rom1P32958 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Rom1P32958 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC5.57□□□□□ -1.52
Rom1P32958 Gm5915-201ENSMUST00000116136 454 ntBASIC5.57□□□□□ -1.52
Rom1P32958 Gm13400-201ENSMUST00000117436 380 ntBASIC5.57□□□□□ -1.52
Rom1P32958 Gm14893-201ENSMUST00000117904 282 ntBASIC5.57□□□□□ -1.52
Rom1P32958 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.57□□□□□ -1.52
Rom1P32958 Gm8812-201ENSMUST00000118496 412 ntBASIC5.57□□□□□ -1.52
Rom1P32958 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.57□□□□□ -1.52
Rom1P32958 Gm11933-201ENSMUST00000121550 375 ntBASIC5.57□□□□□ -1.52
Rom1P32958 n-R5s47-201ENSMUST00000122516 119 ntBASIC5.57□□□□□ -1.52
Rom1P32958 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rom1P32958 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC5.57□□□□□ -1.52
Rom1P32958 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Rom1P32958 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC5.57□□□□□ -1.52
Rom1P32958 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rom1P32958 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms