Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC7.04□□□□□ -1.28
Lire1P11260 Gm27401-201ENSMUST00000184052 173 ntBASIC7.04□□□□□ -1.28
Lire1P11260 Gm4785-201ENSMUST00000191025 751 ntBASIC7.04□□□□□ -1.28
Lire1P11260 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC7.04□□□□□ -1.28
Lire1P11260 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC7.04□□□□□ -1.28
Lire1P11260 Gm4602-201ENSMUST00000203198 308 ntBASIC7.04□□□□□ -1.28
Lire1P11260 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC7.04□□□□□ -1.28
Lire1P11260 Gm32899-201ENSMUST00000219694 207 ntBASIC7.04□□□□□ -1.28
Lire1P11260 AC122295.1-201ENSMUST00000223476 388 ntBASIC7.04□□□□□ -1.28
Lire1P11260 AC165287.1-201ENSMUST00000224985 178 ntBASIC7.04□□□□□ -1.28
Lire1P11260 AC159205.1-201ENSMUST00000225513 1099 ntBASIC7.04□□□□□ -1.28
Lire1P11260 AC122937.2-201ENSMUST00000228258 1051 ntBASIC7.04□□□□□ -1.28
Lire1P11260 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Lire1P11260 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Lire1P11260 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Lire1P11260 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.04□□□□□ -1.28
Lire1P11260 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Lire1P11260 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Lire1P11260 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Lire1P11260 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Lire1P11260 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Lire1P11260 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Lire1P11260 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Lire1P11260 Gm44165-201ENSMUST00000203093 1469 ntBASIC7.04□□□□□ -1.28
Lire1P11260 Gm45112-201ENSMUST00000208576 5125 ntBASIC7.04□□□□□ -1.28
Lire1P11260 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Lire1P11260 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Lire1P11260 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Lire1P11260 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Lire1P11260 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Lire1P11260 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Lire1P11260 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Lire1P11260 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC7.03□□□□□ -1.28
Lire1P11260 Gm12460-201ENSMUST00000117147 357 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Gm8688-201ENSMUST00000118240 969 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Gm11348-201ENSMUST00000118813 318 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Gm11383-201ENSMUST00000121346 807 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Gm13466-201ENSMUST00000121515 999 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Gm6067-201ENSMUST00000121648 491 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Gm14328-201ENSMUST00000122178 408 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Gm13649-201ENSMUST00000122325 606 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC7.03□□□□□ -1.28
Lire1P11260 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Lire1P11260 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Lire1P11260 Gm26959-201ENSMUST00000182376 978 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Lire1P11260 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Lire1P11260 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Lire1P11260 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 Gm29145-201ENSMUST00000189914 456 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC7.03□□□□□ -1.28
Lire1P11260 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC7.03□□□□□ -1.28
Lire1P11260 Gm44743-201ENSMUST00000209062 386 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC7.03□□□□□ -1.28
Lire1P11260 Gm4898-201ENSMUST00000218519 832 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Lire1P11260 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Lire1P11260 Olfr1143-201ENSMUST00000090708 945 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Lire1P11260 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC7.03□□□□□ -1.28
Lire1P11260 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC7.03□□□□□ -1.28
Lire1P11260 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Lire1P11260 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Lire1P11260 Gm37531-201ENSMUST00000191628 5415 ntBASIC7.02□□□□□ -1.28
Lire1P11260 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Lire1P11260 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Lire1P11260 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Lire1P11260 Gm18701-201ENSMUST00000188281 1536 ntBASIC7.02□□□□□ -1.29
Lire1P11260 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Lire1P11260 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Lire1P11260 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Lire1P11260 n-R5s9-201ENSMUST00000104432 117 ntBASIC7.02□□□□□ -1.29
Lire1P11260 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Gm12687-201ENSMUST00000119752 706 ntBASIC7.02□□□□□ -1.29
Lire1P11260 Gm13726-201ENSMUST00000121278 794 ntBASIC7.02□□□□□ -1.29
Lire1P11260 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC7.02□□□□□ -1.29
Lire1P11260 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Mir1981-201ENSMUST00000157934 82 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms