Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm12890-201ENSMUST00000120885 373 ntBASIC8.31□□□□□ -1.08
Col1a1P11087 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC8.31□□□□□ -1.08
Col1a1P11087 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC8.31□□□□□ -1.08
Col1a1P11087 Gm5125-201ENSMUST00000148614 624 ntBASIC8.31□□□□□ -1.08
Col1a1P11087 Gm42443-201ENSMUST00000198084 1155 ntBASIC8.31□□□□□ -1.08
Col1a1P11087 Gm43141-201ENSMUST00000199695 274 ntBASIC8.31□□□□□ -1.08
Col1a1P11087 Gm42673-201ENSMUST00000202676 337 ntBASIC8.31□□□□□ -1.08
Col1a1P11087 Gm44075-201ENSMUST00000204208 216 ntBASIC8.31□□□□□ -1.08
Col1a1P11087 AW822073-201ENSMUST00000075305 555 ntBASIC8.31□□□□□ -1.08
Col1a1P11087 Gm25133-201ENSMUST00000082647 130 ntBASIC8.31□□□□□ -1.08
Col1a1P11087 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Col1a1P11087 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.31□□□□□ -1.08
Col1a1P11087 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
Col1a1P11087 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Col1a1P11087 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Gm8177-201ENSMUST00000181591 1336 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Gm43621-201ENSMUST00000202733 2022 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col1a1P11087 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Col1a1P11087 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Col1a1P11087 Mir760-201ENSMUST00000103257 119 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Gm11799-201ENSMUST00000116110 460 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Gm14893-201ENSMUST00000117904 282 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Gm14925-201ENSMUST00000120611 438 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Sms-ps-201ENSMUST00000121773 1101 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Gm11581-201ENSMUST00000122024 763 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col1a1P11087 Gm22530-201ENSMUST00000158820 118 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Gm4904-201ENSMUST00000178243 1195 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC8.3□□□□□ -1.08
Col1a1P11087 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Gm34768-201ENSMUST00000193884 565 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Gm18430-201ENSMUST00000197534 682 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Gm43089-201ENSMUST00000199162 275 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Col1a1P11087 Gm2602-201ENSMUST00000202112 571 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Gm44422-201ENSMUST00000204142 1025 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.3□□□□□ -1.08
Col1a1P11087 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC8.3□□□□□ -1.08
Col1a1P11087 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col1a1P11087 Gm9800-201ENSMUST00000052615 336 ntBASIC8.3□□□□□ -1.08
Col1a1P11087 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col1a1P11087 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col1a1P11087 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC8.3□□□□□ -1.08
Col1a1P11087 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Gm37109-201ENSMUST00000195475 2254 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Gm42820-201ENSMUST00000200084 3063 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC8.29□□□□□ -1.08
Col1a1P11087 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Col1a1P11087 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col1a1P11087 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC8.29□□□□□ -1.08
Col1a1P11087 Gm18248-201ENSMUST00000191164 1846 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col1a1P11087 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Gm13772-201ENSMUST00000118431 317 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Gm2986-201ENSMUST00000121603 382 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Gm11879-201ENSMUST00000121885 702 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Col1a1P11087 Gm12833-201ENSMUST00000136112 477 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col1a1P11087 Gm27348-201ENSMUST00000184511 170 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Gm27299-201ENSMUST00000184593 103 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms