Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm13489-201ENSMUST00000121234 971 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm12989-201ENSMUST00000122331 731 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm23497-201ENSMUST00000157738 130 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.71□□□□□ -1.34
Hoxd3P09027 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm9613-201ENSMUST00000171662 196 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm8893-201ENSMUST00000172146 1242 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm20686-201ENSMUST00000175846 535 ntTSL 2 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm21737-201ENSMUST00000178112 664 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm20874-201ENSMUST00000178356 663 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm21744-201ENSMUST00000178403 662 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm20901-201ENSMUST00000180177 664 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm17508-201ENSMUST00000181215 681 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm27782-201ENSMUST00000185059 199 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm28477-201ENSMUST00000188125 406 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm28090-201ENSMUST00000189458 664 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm21647-201ENSMUST00000189755 664 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Rpl7a-ps7-201ENSMUST00000198361 776 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm5857-201ENSMUST00000198953 493 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm43228-201ENSMUST00000200735 264 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Zg16-202ENSMUST00000205424 682 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm45888-201ENSMUST00000212348 1229 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 AC124577.1-201ENSMUST00000214044 487 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm17950-201ENSMUST00000214617 646 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.71□□□□□ -1.34
Hoxd3P09027 AC152951.1-201ENSMUST00000218907 266 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Hoxd3P09027 AC156576.1-201ENSMUST00000222315 500 ntTSL 5 BASIC6.71□□□□□ -1.34
Hoxd3P09027 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC6.71□□□□□ -1.34
Hoxd3P09027 AC167140.1-201ENSMUST00000224710 403 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 CT009515.3-201ENSMUST00000226509 671 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Zg16-201ENSMUST00000051122 636 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Hoxd3P09027 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm22444-201ENSMUST00000093693 108 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Cep112-206ENSMUST00000130515 3395 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Cdh16-201ENSMUST00000163783 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Pou2f1-201ENSMUST00000027850 2258 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Elp3-203ENSMUST00000225355 2771 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Rnf19a-203ENSMUST00000228358 3452 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Olfr381-203ENSMUST00000214623 2656 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gsdmc3-202ENSMUST00000185526 2179 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Hoxd3P09027 AC165260.6-204ENSMUST00000225571 3508 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Rnf122-201ENSMUST00000046941 3582 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Sp100-202ENSMUST00000066427 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 2010109I03Rik-201ENSMUST00000077004 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 CT010465.1-202ENSMUST00000221816 1355 ntTSL 5 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Ovol1-201ENSMUST00000025861 2900 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Cdk16-202ENSMUST00000115364 3270 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm37949-201ENSMUST00000192808 2091 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Zfp410-203ENSMUST00000220931 1569 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Ufm1-203ENSMUST00000146598 4890 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm24938-201ENSMUST00000102225 110 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm12421-201ENSMUST00000119071 307 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm4911-201ENSMUST00000119388 945 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm13482-201ENSMUST00000119842 254 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm16057-201ENSMUST00000120811 759 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm14678-201ENSMUST00000121396 482 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm14766-201ENSMUST00000121689 367 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 n-R5s76-201ENSMUST00000122700 113 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms