Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 AC116596.2-203ENSMUST00000227345 731 ntBASIC7.64□□□□□ -1.19
Hoxc8P09025 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Hoxc8P09025 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Hoxc8P09025 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Hoxc8P09025 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Hoxc8P09025 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Hoxc8P09025 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Hoxc8P09025 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Hoxc8P09025 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC7.64□□□□□ -1.19
Hoxc8P09025 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Hoxc8P09025 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Hoxc8P09025 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Hoxc8P09025 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.64□□□□□ -1.19
Hoxc8P09025 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Hoxc8P09025 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Hoxc8P09025 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.64□□□□□ -1.19
Hoxc8P09025 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.64□□□□□ -1.19
Hoxc8P09025 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Hoxc8P09025 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Hoxc8P09025 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Hoxc8P09025 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.63□□□□□ -1.19
Hoxc8P09025 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm37465-201ENSMUST00000192845 3290 ntBASIC7.63□□□□□ -1.19
Hoxc8P09025 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Hoxc8P09025 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC7.63□□□□□ -1.19
Hoxc8P09025 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm23756-201ENSMUST00000157582 114 ntBASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm26353-201ENSMUST00000158224 255 ntBASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm24176-201ENSMUST00000158928 121 ntBASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm21877-201ENSMUST00000185640 694 ntBASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm18430-201ENSMUST00000197534 682 ntBASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm1969-201ENSMUST00000198125 1220 ntBASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC7.63□□□□□ -1.19
Hoxc8P09025 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm5928-201ENSMUST00000221839 466 ntBASIC7.63□□□□□ -1.19
Hoxc8P09025 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC7.63□□□□□ -1.19
Hoxc8P09025 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Hoxc8P09025 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm45407-201ENSMUST00000209499 3676 ntBASIC7.63□□□□□ -1.19
Hoxc8P09025 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Hoxc8P09025 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
Hoxc8P09025 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Hoxc8P09025 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Hoxc8P09025 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hoxc8P09025 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.62□□□□□ -1.19
Hoxc8P09025 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.62□□□□□ -1.19
Hoxc8P09025 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.62□□□□□ -1.19
Hoxc8P09025 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Hoxc8P09025 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Hoxc8P09025 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Hoxc8P09025 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Hoxc8P09025 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Hoxc8P09025 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.62□□□□□ -1.19
Hoxc8P09025 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Hoxc8P09025 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Hoxc8P09025 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Hoxc8P09025 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Hoxc8P09025 AC166574.1-201ENSMUST00000226916 1309 ntBASIC7.62□□□□□ -1.19
Hoxc8P09025 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Hoxc8P09025 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Hoxc8P09025 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Hoxc8P09025 Gm24048-201ENSMUST00000102411 106 ntBASIC7.62□□□□□ -1.19
Hoxc8P09025 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Hoxc8P09025 Gm11445-201ENSMUST00000119101 532 ntBASIC7.62□□□□□ -1.19
Hoxc8P09025 Gm11472-201ENSMUST00000121305 556 ntBASIC7.62□□□□□ -1.19
Hoxc8P09025 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Hoxc8P09025 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Hoxc8P09025 Gm25574-201ENSMUST00000175245 249 ntBASIC7.62□□□□□ -1.19
Hoxc8P09025 Gm27804-201ENSMUST00000185135 119 ntBASIC7.62□□□□□ -1.19
Hoxc8P09025 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.62□□□□□ -1.19
Hoxc8P09025 Gm37439-201ENSMUST00000193150 856 ntBASIC7.62□□□□□ -1.19
Hoxc8P09025 Gm7804-202ENSMUST00000194187 854 ntBASIC7.62□□□□□ -1.19
Hoxc8P09025 Gm18012-201ENSMUST00000204558 773 ntBASIC7.62□□□□□ -1.19
Hoxc8P09025 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.62□□□□□ -1.19
Hoxc8P09025 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.62□□□□□ -1.19
Hoxc8P09025 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Hoxc8P09025 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.62□□□□□ -1.19
Hoxc8P09025 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.62□□□□□ -1.19
Hoxc8P09025 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC7.62□□□□□ -1.19
Hoxc8P09025 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Hoxc8P09025 Gm22748-201ENSMUST00000082493 136 ntBASIC7.62□□□□□ -1.19
Hoxc8P09025 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Hoxc8P09025 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms