Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Gm24790-201ENSMUST00000104285 132 ntBASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Pogz-205ENSMUST00000107270 6399 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Gm20223-201ENSMUST00000199932 805 ntBASIC7.86□□□□□ -1.15
Scn3aA2ASI5 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Gm44101-201ENSMUST00000203951 2221 ntBASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Gm37321-201ENSMUST00000195742 1872 ntBASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Gm23740-201ENSMUST00000157385 100 ntBASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Gm5154-201ENSMUST00000203971 399 ntBASIC7.86□□□□□ -1.15
Scn3aA2ASI5 AC167013.4-201ENSMUST00000226712 317 ntBASIC7.86□□□□□ -1.15
Scn3aA2ASI5 AC135086.1-201ENSMUST00000228621 817 ntBASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
Scn3aA2ASI5 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm37755-201ENSMUST00000195880 2179 ntBASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm37373-201ENSMUST00000194005 2812 ntBASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm25785-201ENSMUST00000104129 125 ntBASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm14863-201ENSMUST00000119648 307 ntBASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm14747-201ENSMUST00000149888 984 ntBASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.85□□□□□ -1.15
Scn3aA2ASI5 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm17895-201ENSMUST00000194028 874 ntBASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm32983-201ENSMUST00000208500 505 ntBASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm7441-201ENSMUST00000220697 1074 ntBASIC7.85□□□□□ -1.15
Scn3aA2ASI5 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.85□□□□□ -1.15
Scn3aA2ASI5 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Scn3aA2ASI5 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 479.6 ms