Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm7394-201ENSMUST00000209138 1032 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm8804-201ENSMUST00000212292 798 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm4780-201ENSMUST00000213206 1242 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm8058-201ENSMUST00000217247 587 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm4796-201ENSMUST00000219802 624 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 AC147245.1-201ENSMUST00000223294 677 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Diaph3-204ENSMUST00000226254 682 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm42820-201ENSMUST00000200084 3063 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm11926-201ENSMUST00000118520 430 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm13463-201ENSMUST00000119020 233 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm12331-201ENSMUST00000119927 622 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm3611-201ENSMUST00000173687 877 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Mir3060-201ENSMUST00000175339 83 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm26959-201ENSMUST00000182376 978 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm28114-201ENSMUST00000187232 379 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm30708-201ENSMUST00000202183 312 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm45198-201ENSMUST00000206796 591 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm5791-201ENSMUST00000220840 489 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm46379-201ENSMUST00000222551 265 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim3Q9R1R2 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm18537-202ENSMUST00000206215 1503 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms