Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm5327-201ENSMUST00000182864 1009 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm29273-201ENSMUST00000188880 262 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm42965-201ENSMUST00000201254 250 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm4874-201ENSMUST00000203589 691 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm19254-201ENSMUST00000204828 294 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 CT030124.1-201ENSMUST00000217130 235 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 AC155305.1-201ENSMUST00000222207 319 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 AC152394.2-202ENSMUST00000228503 1064 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Ap3b2-201ENSMUST00000082090 3804 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm24268-201ENSMUST00000082990 110 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm42811-201ENSMUST00000201951 2768 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm25167-201ENSMUST00000104188 120 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm12365-201ENSMUST00000117931 568 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm15421-202ENSMUST00000118224 399 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm15152-201ENSMUST00000121540 394 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm16407-201ENSMUST00000122134 567 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm23533-201ENSMUST00000157540 245 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm24960-201ENSMUST00000157923 90 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm25437-201ENSMUST00000158282 132 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm6650-201ENSMUST00000166710 614 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm4781-201ENSMUST00000167995 781 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm2930-201ENSMUST00000170403 474 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Rab26os-201ENSMUST00000176215 477 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Txn-ps1-201ENSMUST00000186385 309 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm42558-201ENSMUST00000200982 265 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm18537-201ENSMUST00000205709 989 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 AC162176.1-201ENSMUST00000216490 618 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm23378-201ENSMUST00000082942 107 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm24046-201ENSMUST00000083111 165 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Gm37334-201ENSMUST00000192325 2938 ntBASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ube3bQ9ES34 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm37873-201ENSMUST00000194571 2280 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms