Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm12297-201ENSMUST00000121380 979 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm22811-201ENSMUST00000157468 154 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm37481-201ENSMUST00000195176 403 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm17835-201ENSMUST00000196870 499 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm19596-201ENSMUST00000203685 739 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm44833-201ENSMUST00000208368 331 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm45432-201ENSMUST00000210391 416 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 AC132104.1-201ENSMUST00000213615 260 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm18292-201ENSMUST00000216673 919 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 AC192091.1-201ENSMUST00000218668 439 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm18629-201ENSMUST00000222496 884 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 CT025538.2-201ENSMUST00000226083 772 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 AC122035.2-201ENSMUST00000228698 462 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm44141-201ENSMUST00000204231 1583 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm38147-201ENSMUST00000192397 1798 ntBASIC7.23□□□□□ -1.25
Trim8Q99PJ2 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC7.23□□□□□ -1.25
Trim8Q99PJ2 AC154576.1-202ENSMUST00000223966 3320 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 AC169985.1-201ENSMUST00000223648 2439 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm9256-201ENSMUST00000198106 1420 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm26469-201ENSMUST00000116765 121 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm14749-201ENSMUST00000121269 333 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm23082-201ENSMUST00000157852 133 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm4246-201ENSMUST00000172822 216 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Mir6340-201ENSMUST00000183857 119 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm5541-201ENSMUST00000193248 1113 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm38047-201ENSMUST00000193690 1133 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm6909-201ENSMUST00000209825 989 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm33096-201ENSMUST00000210189 493 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Rpl32l-201ENSMUST00000216127 399 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 AC151904.2-201ENSMUST00000218683 1177 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.22□□□□□ -1.25
Trim8Q99PJ2 AC096628.1-201ENSMUST00000226060 641 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 AC134414.1-201ENSMUST00000228499 1221 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.22□□□□□ -1.25
Trim8Q99PJ2 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms