Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm24768-201ENSMUST00000158512 94 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm17655-201ENSMUST00000167969 255 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm21756-201ENSMUST00000178380 930 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm21405-201ENSMUST00000179024 930 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm28637-201ENSMUST00000179424 345 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm21191-201ENSMUST00000186484 930 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm21489-201ENSMUST00000189668 818 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm29503-201ENSMUST00000191044 930 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm44590-201ENSMUST00000206161 391 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 AC154296.3-201ENSMUST00000214427 712 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 AC091783.3-201ENSMUST00000223969 681 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 A1cf-203ENSMUST00000224400 1204 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 AC164116.2-201ENSMUST00000225398 1038 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 CT571256.1-201ENSMUST00000226045 585 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm16130-201ENSMUST00000153106 2799 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Serpina3f-201ENSMUST00000101080 2207 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm42848-201ENSMUST00000201477 2022 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Rasgrf2-201ENSMUST00000099326 3567 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Tmem268-202ENSMUST00000080336 3630 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Fam90a1a-201ENSMUST00000110741 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Nup98-203ENSMUST00000210682 6694 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Zfp827-201ENSMUST00000087927 2801 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm14904-201ENSMUST00000117067 335 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm13444-201ENSMUST00000119445 522 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm7746-201ENSMUST00000120966 503 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm15596-201ENSMUST00000121139 784 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm11263-201ENSMUST00000121853 749 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm13828-201ENSMUST00000122278 363 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm25164-201ENSMUST00000158908 116 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm7651-201ENSMUST00000173398 901 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm3611-201ENSMUST00000173687 877 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm18843-201ENSMUST00000194982 719 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm5050-201ENSMUST00000197164 775 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm5995-201ENSMUST00000204107 1273 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm9604-201ENSMUST00000211175 433 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 AC104906.1-201ENSMUST00000218122 913 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 AC152394.2-202ENSMUST00000228503 1064 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Srbd1-201ENSMUST00000095187 3530 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms