Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Gm3841-201ENSMUST00000191399 451 ntBASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Gm44356-201ENSMUST00000196731 111 ntBASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Gm43694-201ENSMUST00000200773 1119 ntBASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Gm42959-201ENSMUST00000202184 212 ntBASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Gm18765-201ENSMUST00000203166 660 ntBASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Gm9354-201ENSMUST00000209075 468 ntBASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Gm6909-201ENSMUST00000209825 989 ntBASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 AC159205.2-201ENSMUST00000223759 816 ntBASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 AC154806.5-204ENSMUST00000228900 867 ntBASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Ccdc28bQ8CEG5 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm15154-201ENSMUST00000117590 366 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm11809-201ENSMUST00000120923 950 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm22687-201ENSMUST00000158301 105 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm9399-201ENSMUST00000175771 639 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm29008-201ENSMUST00000189387 298 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm44156-201ENSMUST00000203885 1189 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm45497-201ENSMUST00000211701 740 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm25926-201ENSMUST00000082899 160 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm24405-201ENSMUST00000083033 167 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Mir135b-201ENSMUST00000083501 97 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.99□□□□□ -1.29
Ccdc28bQ8CEG5 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28bQ8CEG5 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.98□□□□□ -1.29
Ccdc28bQ8CEG5 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.98□□□□□ -1.29
Ccdc28bQ8CEG5 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.98□□□□□ -1.29
Ccdc28bQ8CEG5 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28bQ8CEG5 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.98□□□□□ -1.29
Ccdc28bQ8CEG5 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.98□□□□□ -1.29
Ccdc28bQ8CEG5 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC6.98□□□□□ -1.29
Ccdc28bQ8CEG5 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.98□□□□□ -1.29
Ccdc28bQ8CEG5 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28bQ8CEG5 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28bQ8CEG5 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 119.1 ms