Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ccdc60Q8C4J0 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ccdc60Q8C4J0 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.96□□□□□ -0.97
Ccdc60Q8C4J0 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ccdc60Q8C4J0 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
Ccdc60Q8C4J0 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Gm11864-201ENSMUST00000116179 1220 ntBASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Gm5723-201ENSMUST00000203096 432 ntBASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Gm46231-201ENSMUST00000220152 314 ntBASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 AC127242.3-201ENSMUST00000222009 580 ntBASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 AC165157.1-201ENSMUST00000222981 580 ntBASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 AC108947.1-201ENSMUST00000224274 1000 ntBASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Gm11342-203ENSMUST00000224879 1324 ntBASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Gm14615-201ENSMUST00000117575 1816 ntBASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc60Q8C4J0 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Gm5512-202ENSMUST00000220222 1522 ntBASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Gm26419-201ENSMUST00000104272 133 ntBASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Gm17212-201ENSMUST00000166666 259 ntBASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Mir6769b-201ENSMUST00000184793 60 ntBASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Mir7005-201ENSMUST00000185089 69 ntBASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Gm28958-201ENSMUST00000185864 703 ntBASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Gm2221-201ENSMUST00000209342 418 ntBASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Gm45509-201ENSMUST00000209624 1229 ntBASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 AC154361.1-201ENSMUST00000225694 745 ntBASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
Ccdc60Q8C4J0 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Gm14466-201ENSMUST00000119028 451 ntBASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Gm27014-201ENSMUST00000182658 937 ntBASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Gm9114-201ENSMUST00000188558 997 ntBASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Gm10416-201ENSMUST00000197379 645 ntBASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Gm4525-201ENSMUST00000198831 254 ntBASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc60Q8C4J0 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms