Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm24835-201ENSMUST00000116777 111 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm13929-201ENSMUST00000117553 1125 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm15421-202ENSMUST00000118224 399 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm15836-201ENSMUST00000119952 793 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm13751-201ENSMUST00000120280 752 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm13218-201ENSMUST00000128180 265 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Mir1968-201ENSMUST00000157429 68 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm26393-201ENSMUST00000157625 129 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm23387-201ENSMUST00000158586 107 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm38063-201ENSMUST00000193990 342 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm37841-201ENSMUST00000195367 376 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm5586-201ENSMUST00000206264 795 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm17909-201ENSMUST00000207587 907 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm18243-201ENSMUST00000220756 887 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 AC155305.1-201ENSMUST00000222207 319 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Olfr192-201ENSMUST00000080251 925 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 AC122887.2-201ENSMUST00000219465 1603 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm16433-201ENSMUST00000062429 1984 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Ces3a-202ENSMUST00000093223 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm44423-201ENSMUST00000203746 3158 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm12636-201ENSMUST00000117395 624 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm15739-201ENSMUST00000118049 872 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm14587-201ENSMUST00000121714 658 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm23426-201ENSMUST00000122483 318 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm22424-201ENSMUST00000158527 87 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Aste1-204ENSMUST00000167674 1227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm20543-201ENSMUST00000174200 726 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm19777-201ENSMUST00000191940 358 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm4410-201ENSMUST00000199349 686 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Gm31532-201ENSMUST00000203555 767 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Trim47Q8C0E3 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC8.85□□□□□ -0.99
Trim47Q8C0E3 AL772397.1-201ENSMUST00000216707 606 ntBASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms