Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm43728-201ENSMUST00000198817 2622 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm43343-201ENSMUST00000202454 1926 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm38262-201ENSMUST00000194760 1382 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm25725-201ENSMUST00000104528 130 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm12219-201ENSMUST00000119198 443 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm14202-201ENSMUST00000120121 311 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm11259-201ENSMUST00000120554 715 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm6428-201ENSMUST00000161062 345 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Zfp572-202ENSMUST00000184208 1078 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Ighv1-38-201ENSMUST00000192755 349 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm31579-201ENSMUST00000203306 966 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm18562-201ENSMUST00000209949 915 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm5791-201ENSMUST00000220840 489 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm14324-201ENSMUST00000121358 3051 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc40Q8BI79 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm22152-201ENSMUST00000116966 125 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm7831-201ENSMUST00000117990 552 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm12727-201ENSMUST00000119885 359 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm13282-201ENSMUST00000121577 545 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm13221-201ENSMUST00000121712 430 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm23757-201ENSMUST00000158353 100 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm20111-201ENSMUST00000184830 319 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm37678-201ENSMUST00000192908 1146 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm42965-201ENSMUST00000201254 250 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm43226-201ENSMUST00000202438 259 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm45782-201ENSMUST00000212670 366 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 AC139569.1-201ENSMUST00000226080 614 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 AC158981.1-201ENSMUST00000226943 1205 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 229.6 ms