Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Rnf38Q8BI21 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Rnf38Q8BI21 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm45250-201ENSMUST00000209414 3592 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm24142-201ENSMUST00000101960 107 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm11969-201ENSMUST00000118848 356 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Defa-ps10-201ENSMUST00000121649 171 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm8164-201ENSMUST00000169120 1192 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm26197-201ENSMUST00000175033 115 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Mir6940-201ENSMUST00000183447 70 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm19030-201ENSMUST00000194947 552 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm18469-201ENSMUST00000208850 439 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 CT030184.2-201ENSMUST00000223064 263 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 CT030170.6-202ENSMUST00000223186 544 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 AL645546.2-201ENSMUST00000224526 265 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 CT009713.1-201ENSMUST00000224828 853 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm23058-201ENSMUST00000093703 107 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm25099-201ENSMUST00000093716 116 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rnf38Q8BI21 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm37685-201ENSMUST00000193507 2177 ntBASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Mir683-2-201ENSMUST00000102099 109 ntBASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm15422-201ENSMUST00000117453 541 ntBASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm13929-201ENSMUST00000117553 1125 ntBASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm15079-201ENSMUST00000121943 216 ntBASIC7.11□□□□□ -1.27
Rnf38Q8BI21 n-R5s47-201ENSMUST00000122516 119 ntBASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm3611-201ENSMUST00000173687 877 ntBASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Mir683-1-201ENSMUST00000179371 109 ntBASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm18699-201ENSMUST00000190713 243 ntBASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC7.11□□□□□ -1.27
Rnf38Q8BI21 Gm38203-201ENSMUST00000191815 245 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms