Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Rif1Q6PR54 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Prg4-202ENSMUST00000111901 3495 ntTSL 5 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Gm12258-201ENSMUST00000093768 2524 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Gm13798-201ENSMUST00000118285 139 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 Mir1929-201ENSMUST00000158635 93 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 Gm23968-201ENSMUST00000175047 125 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 Gm7952-201ENSMUST00000180540 984 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Gm6693-201ENSMUST00000189583 813 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 Gm19231-201ENSMUST00000193212 830 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 Gm9504-201ENSMUST00000196322 468 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Zg16-202ENSMUST00000205424 682 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Gm7546-202ENSMUST00000211354 275 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Gm19217-201ENSMUST00000218238 328 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 AC154583.1-201ENSMUST00000224788 655 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Gm26003-201ENSMUST00000083061 113 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Cd36-201ENSMUST00000082367 3016 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rif1Q6PR54 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Gm45534-201ENSMUST00000211449 2339 ntBASIC6.18□□□□□ -1.42
Rif1Q6PR54 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Utp14a-201ENSMUST00000080713 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rif1Q6PR54 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gm44986-201ENSMUST00000206292 2829 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gm15766-201ENSMUST00000118025 813 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gm26970-201ENSMUST00000182990 964 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 2610001J05Rik-204ENSMUST00000185361 767 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gm5260-201ENSMUST00000186157 949 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gm45790-201ENSMUST00000211986 1629 ntTSL 5 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rif1Q6PR54 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Adtrp-201ENSMUST00000072012 2440 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gm37151-201ENSMUST00000194631 5007 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gm15188-201ENSMUST00000121264 704 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gm6044-201ENSMUST00000121819 499 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 Adh6a-201ENSMUST00000013455 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Mir6952-201ENSMUST00000185092 61 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gm43609-201ENSMUST00000199084 2712 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 Gm43233-201ENSMUST00000200491 616 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rif1Q6PR54 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 AC153940.1-201ENSMUST00000220149 5300 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 AC158981.1-201ENSMUST00000226943 1205 ntBASIC6.17□□□□□ -1.42
Rif1Q6PR54 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rif1Q6PR54 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms