Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm3140-201ENSMUST00000163523 481 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm8190-201ENSMUST00000199603 586 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm9315-201ENSMUST00000222696 908 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 AC138329.1-201ENSMUST00000225040 471 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 AC122533.1-201ENSMUST00000225177 767 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 AC125064.1-201ENSMUST00000225801 295 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 AC132833.4-201ENSMUST00000228313 203 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm22581-201ENSMUST00000083735 136 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm15765-201ENSMUST00000118407 910 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm5843-201ENSMUST00000121631 476 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Mir6244-201ENSMUST00000184156 117 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm28846-201ENSMUST00000189161 368 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm19175-201ENSMUST00000199895 916 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm9367-201ENSMUST00000205703 546 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 AC153557.1-201ENSMUST00000217697 403 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 AC154558.1-201ENSMUST00000222278 415 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 AC133203.1-201ENSMUST00000228241 301 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC8.26□□□□□ -1.09
Nup98Q6PFD9 Gm43410-201ENSMUST00000197510 2234 ntBASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm20045-201ENSMUST00000192658 5577 ntBASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Trio-210ENSMUST00000227337 6375 ntBASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 AC156025.3-201ENSMUST00000225919 3095 ntBASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm12608-201ENSMUST00000122013 1715 ntBASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm4904-201ENSMUST00000178243 1195 ntBASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm5345-201ENSMUST00000183076 1014 ntBASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm45626-201ENSMUST00000210093 361 ntBASIC8.25□□□□□ -1.09
Nup98Q6PFD9 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm18040-201ENSMUST00000217922 827 ntBASIC8.25□□□□□ -1.09
Nup98Q6PFD9 AC124601.1-201ENSMUST00000220531 135 ntBASIC8.25□□□□□ -1.09
Nup98Q6PFD9 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm8607-201ENSMUST00000221864 431 ntBASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Phxr4-202ENSMUST00000216590 1391 ntBASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms