Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Syne3Q4FZC9 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm12306-201ENSMUST00000117256 171 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm7129-201ENSMUST00000117402 997 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm15225-201ENSMUST00000120449 1017 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm11945-201ENSMUST00000120551 476 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm5611-201ENSMUST00000164523 852 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm24923-201ENSMUST00000178201 88 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm37225-201ENSMUST00000193423 325 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm17965-201ENSMUST00000193904 517 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm42919-201ENSMUST00000197753 1284 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm45782-201ENSMUST00000212670 366 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 AL591207.2-201ENSMUST00000222991 337 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 AC131710.2-201ENSMUST00000226773 683 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 AC165154.2-201ENSMUST00000227310 336 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm42479-201ENSMUST00000198654 1356 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 AC136019.1-201ENSMUST00000226503 1412 ntBASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Syne3Q4FZC9 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm11928-201ENSMUST00000119323 437 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm5970-201ENSMUST00000131638 1216 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm23116-201ENSMUST00000158481 67 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm3760-201ENSMUST00000167475 804 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm7502-201ENSMUST00000169235 733 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm28006-201ENSMUST00000183841 122 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Mir6409-201ENSMUST00000184957 92 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm28573-201ENSMUST00000187821 380 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm28438-201ENSMUST00000188299 345 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm28145-201ENSMUST00000189742 380 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm28400-201ENSMUST00000191332 380 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm19030-201ENSMUST00000194947 552 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 119.8 ms