Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Snora47-201ENSMUST00000157483 138 ntBASIC7.69□□□□□ -1.18
NcanP55066 Gm24719-201ENSMUST00000157520 110 ntBASIC7.69□□□□□ -1.18
NcanP55066 Gm24286-201ENSMUST00000157632 128 ntBASIC7.69□□□□□ -1.18
NcanP55066 Gm11107-201ENSMUST00000165414 505 ntBASIC7.69□□□□□ -1.18
NcanP55066 Gm23806-201ENSMUST00000175157 109 ntBASIC7.69□□□□□ -1.18
NcanP55066 Gm20702-201ENSMUST00000176181 460 ntBASIC7.69□□□□□ -1.18
NcanP55066 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC7.69□□□□□ -1.18
NcanP55066 Gm24756-201ENSMUST00000177002 96 ntBASIC7.69□□□□□ -1.18
NcanP55066 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Gm25942-201ENSMUST00000180080 110 ntBASIC7.69□□□□□ -1.18
NcanP55066 Gm26784-201ENSMUST00000181666 410 ntBASIC7.69□□□□□ -1.18
NcanP55066 Mir6403-201ENSMUST00000185007 129 ntBASIC7.69□□□□□ -1.18
NcanP55066 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.69□□□□□ -1.18
NcanP55066 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Gm3148-201ENSMUST00000203594 612 ntBASIC7.69□□□□□ -1.18
NcanP55066 Gm18012-201ENSMUST00000204558 773 ntBASIC7.69□□□□□ -1.18
NcanP55066 Gm4374-201ENSMUST00000204929 424 ntBASIC7.69□□□□□ -1.18
NcanP55066 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC7.69□□□□□ -1.18
NcanP55066 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC7.69□□□□□ -1.18
NcanP55066 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.69□□□□□ -1.18
NcanP55066 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC7.69□□□□□ -1.18
NcanP55066 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
NcanP55066 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
NcanP55066 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
NcanP55066 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NcanP55066 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC7.69□□□□□ -1.18
NcanP55066 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC7.68□□□□□ -1.18
NcanP55066 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 Casp14-202ENSMUST00000219237 2200 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
NcanP55066 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
NcanP55066 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 AC154347.1-201ENSMUST00000221358 3105 ntBASIC7.68□□□□□ -1.18
NcanP55066 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.68□□□□□ -1.18
NcanP55066 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 Gm43890-201ENSMUST00000203437 2799 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 AC159379.2-201ENSMUST00000220244 2482 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
NcanP55066 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
NcanP55066 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
NcanP55066 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
NcanP55066 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
NcanP55066 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
NcanP55066 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 Mir466j-201ENSMUST00000116876 122 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm13835-201ENSMUST00000118459 685 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm14466-201ENSMUST00000119028 451 ntBASIC7.68□□□□□ -1.18
NcanP55066 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC7.68□□□□□ -1.18
NcanP55066 Gm23250-201ENSMUST00000157444 267 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm25603-201ENSMUST00000158361 105 ntBASIC7.68□□□□□ -1.18
NcanP55066 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.68□□□□□ -1.18
NcanP55066 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
NcanP55066 Gm22990-201ENSMUST00000175427 89 ntBASIC7.68□□□□□ -1.18
NcanP55066 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
NcanP55066 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.68□□□□□ -1.18
NcanP55066 Gm29143-201ENSMUST00000189462 201 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC7.68□□□□□ -1.18
NcanP55066 Gm38226-201ENSMUST00000192207 521 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm43836-201ENSMUST00000196532 381 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm42634-201ENSMUST00000197362 381 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm7285-201ENSMUST00000198801 580 ntBASIC7.68□□□□□ -1.18
NcanP55066 Igkv4-73-201ENSMUST00000199760 358 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm43850-201ENSMUST00000202021 578 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm43459-201ENSMUST00000202093 331 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC7.68□□□□□ -1.18
NcanP55066 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.68□□□□□ -1.18
NcanP55066 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC7.68□□□□□ -1.18
NcanP55066 CT485612.1-201ENSMUST00000222555 382 ntBASIC7.68□□□□□ -1.18
NcanP55066 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC7.68□□□□□ -1.18
NcanP55066 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 Gm43571-201ENSMUST00000200067 3098 ntBASIC7.68□□□□□ -1.18
NcanP55066 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NcanP55066 Gm45407-201ENSMUST00000209499 3676 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm37706-201ENSMUST00000195379 2765 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm17076-201ENSMUST00000165185 1401 ntBASIC7.68□□□□□ -1.18
NcanP55066 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.68□□□□□ -1.18
NcanP55066 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms