Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC7.96□□□□□ -1.14
Sox1P53783 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC7.96□□□□□ -1.14
Sox1P53783 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC7.96□□□□□ -1.14
Sox1P53783 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.14
Sox1P53783 Slco1c1-206ENSMUST00000205214 2515 ntTSL 5 BASIC7.96□□□□□ -1.14
Sox1P53783 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.96□□□□□ -1.14
Sox1P53783 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Sox1P53783 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC7.96□□□□□ -1.14
Sox1P53783 Tmem63c-201ENSMUST00000110187 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Sox1P53783 Ctdsp2-201ENSMUST00000105255 4136 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Sox1P53783 Slc29a3-202ENSMUST00000119595 3123 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Sox1P53783 Ap1s3-203ENSMUST00000162342 2876 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Sox1P53783 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Sox1P53783 Gm44289-201ENSMUST00000204144 1390 ntBASIC7.96□□□□□ -1.14
Sox1P53783 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.96□□□□□ -1.14
Sox1P53783 Fgr-201ENSMUST00000030693 3363 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Sox1P53783 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Sox1P53783 Zfp939-201ENSMUST00000061201 2131 ntBASIC7.96□□□□□ -1.14
Sox1P53783 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Sox1P53783 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Sox1P53783 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Sox1P53783 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Sox1P53783 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC7.95□□□□□ -1.14
Sox1P53783 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC7.95□□□□□ -1.14
Sox1P53783 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Sox1P53783 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Tcaim-201ENSMUST00000052740 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Sox1P53783 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Sox1P53783 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Sox1P53783 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Sox1P53783 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Sox1P53783 Gm15574-201ENSMUST00000119937 405 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Gm11387-201ENSMUST00000120266 772 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Gm12444-201ENSMUST00000121512 877 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Gm16471-201ENSMUST00000121940 618 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Gm12152-201ENSMUST00000122465 684 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Gm26211-201ENSMUST00000158578 129 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC7.95□□□□□ -1.14
Sox1P53783 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Gm26914-201ENSMUST00000182262 223 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Mir6973b-201ENSMUST00000184185 80 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Gm29576-201ENSMUST00000188020 678 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Gm21742-201ENSMUST00000189352 548 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Gm28354-201ENSMUST00000190904 678 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Gm7804-202ENSMUST00000194187 854 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Gm37908-201ENSMUST00000195828 470 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Ckb-ps1-201ENSMUST00000199192 1127 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Gm4860-201ENSMUST00000200368 454 ntBASIC7.95□□□□□ -1.14
Sox1P53783 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Gm44212-201ENSMUST00000205016 897 ntBASIC7.95□□□□□ -1.14
Sox1P53783 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC7.95□□□□□ -1.14
Sox1P53783 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC7.95□□□□□ -1.14
Sox1P53783 AC122251.1-201ENSMUST00000227717 639 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Sox1P53783 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Gm7435-202ENSMUST00000216003 2424 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.95□□□□□ -1.14
Sox1P53783 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Runx1-207ENSMUST00000189679 2538 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Ces2b-201ENSMUST00000059449 3408 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC7.95□□□□□ -1.14
Sox1P53783 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC7.95□□□□□ -1.14
Sox1P53783 Gm1070-201ENSMUST00000114185 2874 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Gm14976-201ENSMUST00000117055 1394 ntBASIC7.95□□□□□ -1.14
Sox1P53783 Camk2a-201ENSMUST00000025519 3244 ntTSL 5 BASIC7.95□□□□□ -1.14
Sox1P53783 Parp9-202ENSMUST00000114877 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Tmem18-201ENSMUST00000057151 2971 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC7.95□□□□□ -1.14
Sox1P53783 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Sox1P53783 Cdh8-204ENSMUST00000142129 2711 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Sox1P53783 Gria2-202ENSMUST00000107745 4026 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
Sox1P53783 Gm18066-201ENSMUST00000210904 1774 ntBASIC7.94□□□□□ -1.14
Sox1P53783 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Sox1P53783 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Sox1P53783 Gm14445-201ENSMUST00000117051 1484 ntBASIC7.94□□□□□ -1.14
Sox1P53783 Zfp658-202ENSMUST00000107972 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Sox1P53783 Slc12a8-201ENSMUST00000059056 3166 ntAPPRIS P2 TSL 2 BASIC7.94□□□□□ -1.14
Sox1P53783 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms