Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.67□□□□□ -1.34
Sox6P40645 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC6.67□□□□□ -1.34
Sox6P40645 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.67□□□□□ -1.34
Sox6P40645 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.67□□□□□ -1.34
Sox6P40645 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC6.67□□□□□ -1.34
Sox6P40645 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Gm7562-201ENSMUST00000210502 2537 ntBASIC6.67□□□□□ -1.34
Sox6P40645 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Sox6P40645 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Sox6P40645 Gm7091-201ENSMUST00000116438 586 ntBASIC6.67□□□□□ -1.34
Sox6P40645 Gm15422-201ENSMUST00000117453 541 ntBASIC6.67□□□□□ -1.34
Sox6P40645 Gm11810-201ENSMUST00000118311 333 ntBASIC6.67□□□□□ -1.34
Sox6P40645 Gm12518-201ENSMUST00000122075 779 ntBASIC6.67□□□□□ -1.34
Sox6P40645 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox6P40645 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Gm23222-201ENSMUST00000158117 76 ntBASIC6.67□□□□□ -1.34
Sox6P40645 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.67□□□□□ -1.34
Sox6P40645 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Gm22119-201ENSMUST00000175594 99 ntBASIC6.67□□□□□ -1.34
Sox6P40645 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox6P40645 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox6P40645 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Gm42696-201ENSMUST00000199859 1142 ntBASIC6.67□□□□□ -1.34
Sox6P40645 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.67□□□□□ -1.34
Sox6P40645 Gm44982-201ENSMUST00000208795 471 ntBASIC6.67□□□□□ -1.34
Sox6P40645 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.67□□□□□ -1.34
Sox6P40645 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox6P40645 Gm4780-201ENSMUST00000213206 1242 ntBASIC6.67□□□□□ -1.34
Sox6P40645 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox6P40645 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC6.67□□□□□ -1.34
Sox6P40645 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.67□□□□□ -1.34
Sox6P40645 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.67□□□□□ -1.34
Sox6P40645 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.67□□□□□ -1.34
Sox6P40645 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox6P40645 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox6P40645 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox6P40645 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Sox6P40645 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox6P40645 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox6P40645 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.66□□□□□ -1.34
Sox6P40645 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Sox6P40645 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox6P40645 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox6P40645 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox6P40645 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.66□□□□□ -1.34
Sox6P40645 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Sox6P40645 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.66□□□□□ -1.34
Sox6P40645 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.66□□□□□ -1.34
Sox6P40645 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.66□□□□□ -1.34
Sox6P40645 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox6P40645 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.66□□□□□ -1.34
Sox6P40645 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox6P40645 Gm5809-201ENSMUST00000121854 529 ntBASIC6.66□□□□□ -1.34
Sox6P40645 Mir1907-201ENSMUST00000122509 90 ntBASIC6.66□□□□□ -1.34
Sox6P40645 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox6P40645 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.66□□□□□ -1.34
Sox6P40645 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.66□□□□□ -1.34
Sox6P40645 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC6.66□□□□□ -1.34
Sox6P40645 Gm24130-201ENSMUST00000158536 151 ntBASIC6.66□□□□□ -1.34
Sox6P40645 Mir199b-201ENSMUST00000175066 110 ntBASIC6.66□□□□□ -1.34
Sox6P40645 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Sox6P40645 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox6P40645 Gm27019-201ENSMUST00000183056 404 ntBASIC6.66□□□□□ -1.34
Sox6P40645 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox6P40645 Gm18254-201ENSMUST00000185699 1204 ntBASIC6.66□□□□□ -1.34
Sox6P40645 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
Sox6P40645 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
Sox6P40645 Gm9723-201ENSMUST00000192100 457 ntBASIC6.66□□□□□ -1.34
Sox6P40645 Gm6197-201ENSMUST00000192273 454 ntBASIC6.66□□□□□ -1.34
Sox6P40645 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC6.66□□□□□ -1.34
Sox6P40645 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC6.66□□□□□ -1.34
Sox6P40645 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC6.66□□□□□ -1.34
Sox6P40645 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox6P40645 Gm42573-201ENSMUST00000202327 478 ntBASIC6.66□□□□□ -1.34
Sox6P40645 Gm34583-203ENSMUST00000202586 454 ntBASIC6.66□□□□□ -1.34
Sox6P40645 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC6.66□□□□□ -1.34
Sox6P40645 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.66□□□□□ -1.34
Sox6P40645 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms