Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Gm2762-207ENSMUST00000202739 2665 ntBASIC8.04□□□□□ -1.12
Col2a1P28481 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col2a1P28481 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Col2a1P28481 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col2a1P28481 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
Col2a1P28481 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col2a1P28481 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC8.04□□□□□ -1.12
Col2a1P28481 Gm4992-201ENSMUST00000120256 768 ntBASIC8.04□□□□□ -1.12
Col2a1P28481 Gm14746-201ENSMUST00000120309 741 ntBASIC8.04□□□□□ -1.12
Col2a1P28481 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC8.04□□□□□ -1.12
Col2a1P28481 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Col2a1P28481 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Col2a1P28481 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.04□□□□□ -1.12
Col2a1P28481 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.04□□□□□ -1.12
Col2a1P28481 Gm28846-201ENSMUST00000189161 368 ntBASIC8.04□□□□□ -1.12
Col2a1P28481 Gm43689-201ENSMUST00000195951 427 ntBASIC8.04□□□□□ -1.12
Col2a1P28481 Gm19185-201ENSMUST00000196365 643 ntBASIC8.04□□□□□ -1.12
Col2a1P28481 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC8.04□□□□□ -1.12
Col2a1P28481 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC8.04□□□□□ -1.12
Col2a1P28481 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Gm18955-201ENSMUST00000223173 649 ntBASIC8.04□□□□□ -1.12
Col2a1P28481 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col2a1P28481 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col2a1P28481 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Gm43285-201ENSMUST00000196563 3592 ntBASIC8.04□□□□□ -1.12
Col2a1P28481 AC154597.1-201ENSMUST00000224095 2713 ntBASIC8.04□□□□□ -1.12
Col2a1P28481 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col2a1P28481 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Col2a1P28481 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Col2a1P28481 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col2a1P28481 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col2a1P28481 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col2a1P28481 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col2a1P28481 Gm13983-201ENSMUST00000118018 865 ntBASIC8.03□□□□□ -1.12
Col2a1P28481 Gm12242-201ENSMUST00000118824 738 ntBASIC8.03□□□□□ -1.12
Col2a1P28481 Gm5843-201ENSMUST00000121631 476 ntBASIC8.03□□□□□ -1.12
Col2a1P28481 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col2a1P28481 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col2a1P28481 Gm23740-201ENSMUST00000157385 100 ntBASIC8.03□□□□□ -1.12
Col2a1P28481 Gm24155-201ENSMUST00000175259 110 ntBASIC8.03□□□□□ -1.12
Col2a1P28481 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC8.03□□□□□ -1.12
Col2a1P28481 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC8.03□□□□□ -1.12
Col2a1P28481 Gm9167-201ENSMUST00000182469 962 ntBASIC8.03□□□□□ -1.12
Col2a1P28481 Gm27295-201ENSMUST00000184264 153 ntBASIC8.03□□□□□ -1.12
Col2a1P28481 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC8.03□□□□□ -1.12
Col2a1P28481 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col2a1P28481 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC8.03□□□□□ -1.12
Col2a1P28481 Gm7351-201ENSMUST00000210745 580 ntBASIC8.03□□□□□ -1.12
Col2a1P28481 AC125064.1-201ENSMUST00000225801 295 ntBASIC8.03□□□□□ -1.12
Col2a1P28481 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Col2a1P28481 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.03□□□□□ -1.12
Col2a1P28481 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Col2a1P28481 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Col2a1P28481 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col2a1P28481 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col2a1P28481 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col2a1P28481 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC8.03□□□□□ -1.12
Col2a1P28481 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Col2a1P28481 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col2a1P28481 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.03□□□□□ -1.12
Col2a1P28481 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col2a1P28481 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col2a1P28481 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col2a1P28481 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col2a1P28481 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.12
Col2a1P28481 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
Col2a1P28481 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
Col2a1P28481 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Col2a1P28481 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Col2a1P28481 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Gm24473-201ENSMUST00000104483 131 ntBASIC8.02□□□□□ -1.13
Col2a1P28481 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Gm25722-201ENSMUST00000157498 279 ntBASIC8.02□□□□□ -1.13
Col2a1P28481 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
Col2a1P28481 Gm9504-201ENSMUST00000196322 468 ntBASIC8.02□□□□□ -1.13
Col2a1P28481 Gm43141-201ENSMUST00000199695 274 ntBASIC8.02□□□□□ -1.13
Col2a1P28481 Gm42673-201ENSMUST00000202676 337 ntBASIC8.02□□□□□ -1.13
Col2a1P28481 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 AC154834.1-201ENSMUST00000224697 358 ntBASIC8.02□□□□□ -1.13
Col2a1P28481 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms