Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC5.85□□□□□ -1.47
Cdx1P18111 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm4977-201ENSMUST00000215709 1262 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC5.85□□□□□ -1.47
Cdx1P18111 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC5.85□□□□□ -1.47
Cdx1P18111 AC157650.2-201ENSMUST00000224666 328 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm5815-201ENSMUST00000050706 1185 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Mir185-201ENSMUST00000083530 65 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cdx1P18111 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC5.85□□□□□ -1.47
Cdx1P18111 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Cdx1P18111 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Cdx1P18111 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdx1P18111 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdx1P18111 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdx1P18111 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.85□□□□□ -1.47
Cdx1P18111 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC5.84□□□□□ -1.47
Cdx1P18111 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.84□□□□□ -1.47
Cdx1P18111 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm18310-201ENSMUST00000206494 3912 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Cdx1P18111 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cdx1P18111 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm38082-201ENSMUST00000192800 6882 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Gm7842-201ENSMUST00000217691 1379 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Cdx1P18111 CT010470.1-201ENSMUST00000225364 1876 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm37423-201ENSMUST00000194246 3342 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cdx1P18111 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm23706-201ENSMUST00000104369 82 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm15843-201ENSMUST00000146593 529 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm22847-201ENSMUST00000157707 105 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Gm23757-201ENSMUST00000158353 100 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm24576-201ENSMUST00000175508 248 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Gm10182-201ENSMUST00000178676 273 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC5.84□□□□□ -1.47
Cdx1P18111 1700030O20Rik-201ENSMUST00000185546 594 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm7200-201ENSMUST00000188426 1163 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm19739-201ENSMUST00000195941 153 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Gm17979-201ENSMUST00000196646 611 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Gm19211-201ENSMUST00000200251 1206 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC5.84□□□□□ -1.47
Cdx1P18111 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm45399-201ENSMUST00000209955 1016 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC5.84□□□□□ -1.47
Cdx1P18111 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm18629-201ENSMUST00000222496 884 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 AC132446.1-201ENSMUST00000222655 226 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 AC151982.1-201ENSMUST00000223546 464 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cdx1P18111 AC154595.1-201ENSMUST00000225533 1059 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cdx1P18111 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cdx1P18111 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cdx1P18111 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms