Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Gm24048-201ENSMUST00000102411 106 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Gm23527-201ENSMUST00000104570 130 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Gm15000-201ENSMUST00000118275 1243 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Gm8215-201ENSMUST00000120627 990 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Gm4887-201ENSMUST00000122230 1053 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Gm2709-201ENSMUST00000142979 350 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Gm6489-201ENSMUST00000178167 696 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Gm18469-201ENSMUST00000208850 439 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Gm45497-201ENSMUST00000211701 740 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Gm7943-201ENSMUST00000212078 1034 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 AC127224.1-201ENSMUST00000218094 453 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Gm19056-201ENSMUST00000218220 797 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp6P0C0A3 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.72□□□□□ -1.17
Chmp6P0C0A3 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gm34294-201ENSMUST00000191912 4263 ntBASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gm15484-201ENSMUST00000118871 828 ntBASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gm15188-201ENSMUST00000121264 704 ntBASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Pea15b-201ENSMUST00000182806 387 ntBASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 AC125019.1-201ENSMUST00000224809 908 ntBASIC7.72□□□□□ -1.17
Chmp6P0C0A3 AC154692.1-202ENSMUST00000226632 1231 ntBASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gm22865-201ENSMUST00000083949 214 ntBASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gm44093-201ENSMUST00000204381 1802 ntBASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.72□□□□□ -1.17
Chmp6P0C0A3 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Chmp6P0C0A3 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC7.71□□□□□ -1.17
Chmp6P0C0A3 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Chmp6P0C0A3 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Chmp6P0C0A3 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Chmp6P0C0A3 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Chmp6P0C0A3 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Chmp6P0C0A3 Gm29670-201ENSMUST00000190228 2491 ntBASIC7.71□□□□□ -1.17
Chmp6P0C0A3 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.71□□□□□ -1.17
Chmp6P0C0A3 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Chmp6P0C0A3 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Chmp6P0C0A3 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Chmp6P0C0A3 Gm16044-201ENSMUST00000118475 450 ntBASIC7.71□□□□□ -1.18
Chmp6P0C0A3 Gm11343-201ENSMUST00000120579 599 ntBASIC7.71□□□□□ -1.18
Chmp6P0C0A3 Gm13940-201ENSMUST00000121023 301 ntBASIC7.71□□□□□ -1.18
Chmp6P0C0A3 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Chmp6P0C0A3 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC7.71□□□□□ -1.18
Chmp6P0C0A3 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.71□□□□□ -1.18
Chmp6P0C0A3 Gm26729-201ENSMUST00000180744 352 ntBASIC7.71□□□□□ -1.18
Chmp6P0C0A3 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms