Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm23979-201ENSMUST00000104071 128 ntBASIC9.21□□□□□ -0.94
Hoxc9P09633 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC9.21□□□□□ -0.94
Hoxc9P09633 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxc9P09633 Gm12540-201ENSMUST00000121938 319 ntBASIC9.21□□□□□ -0.94
Hoxc9P09633 Gm15164-201ENSMUST00000122203 271 ntBASIC9.21□□□□□ -0.94
Hoxc9P09633 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxc9P09633 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxc9P09633 Gm23810-201ENSMUST00000175150 74 ntBASIC9.21□□□□□ -0.94
Hoxc9P09633 Gm22990-201ENSMUST00000175427 89 ntBASIC9.21□□□□□ -0.94
Hoxc9P09633 Gm37189-201ENSMUST00000192131 298 ntBASIC9.21□□□□□ -0.94
Hoxc9P09633 Gm19088-201ENSMUST00000198800 566 ntBASIC9.21□□□□□ -0.94
Hoxc9P09633 AC117240.1-201ENSMUST00000199436 61 ntBASIC9.21□□□□□ -0.94
Hoxc9P09633 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC9.21□□□□□ -0.94
Hoxc9P09633 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC9.21□□□□□ -0.94
Hoxc9P09633 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC9.21□□□□□ -0.94
Hoxc9P09633 Gm18620-201ENSMUST00000222295 324 ntBASIC9.21□□□□□ -0.94
Hoxc9P09633 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Hoxc9P09633 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Hoxc9P09633 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Hoxc9P09633 Mir425-201ENSMUST00000083645 85 ntBASIC9.21□□□□□ -0.94
Hoxc9P09633 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Hoxc9P09633 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC9.21□□□□□ -0.94
Hoxc9P09633 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxc9P09633 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxc9P09633 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxc9P09633 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC9.21□□□□□ -0.94
Hoxc9P09633 Gm44745-201ENSMUST00000206563 2723 ntBASIC9.21□□□□□ -0.94
Hoxc9P09633 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Hoxc9P09633 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxc9P09633 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxc9P09633 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Hoxc9P09633 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxc9P09633 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxc9P09633 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Hoxc9P09633 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxc9P09633 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxc9P09633 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC9.2□□□□□ -0.94
Hoxc9P09633 Gm44950-201ENSMUST00000206403 2296 ntBASIC9.2□□□□□ -0.94
Hoxc9P09633 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxc9P09633 Gm37499-201ENSMUST00000194683 3478 ntBASIC9.2□□□□□ -0.94
Hoxc9P09633 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxc9P09633 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxc9P09633 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxc9P09633 Gm25785-201ENSMUST00000104129 125 ntBASIC9.2□□□□□ -0.94
Hoxc9P09633 Gm12439-201ENSMUST00000117162 365 ntBASIC9.2□□□□□ -0.94
Hoxc9P09633 Gm23968-201ENSMUST00000175047 125 ntBASIC9.2□□□□□ -0.94
Hoxc9P09633 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Hoxc9P09633 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Hoxc9P09633 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Hoxc9P09633 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC9.2□□□□□ -0.94
Hoxc9P09633 Gm17895-201ENSMUST00000194028 874 ntBASIC9.2□□□□□ -0.94
Hoxc9P09633 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC9.2□□□□□ -0.94
Hoxc9P09633 Gm43459-201ENSMUST00000202093 331 ntBASIC9.2□□□□□ -0.94
Hoxc9P09633 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxc9P09633 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxc9P09633 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxc9P09633 AC135086.1-201ENSMUST00000228621 817 ntBASIC9.2□□□□□ -0.94
Hoxc9P09633 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Hoxc9P09633 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxc9P09633 Phxr4-202ENSMUST00000216590 1391 ntBASIC9.2□□□□□ -0.94
Hoxc9P09633 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Hoxc9P09633 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxc9P09633 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Hoxc9P09633 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxc9P09633 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC9.2□□□□□ -0.94
Hoxc9P09633 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxc9P09633 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxc9P09633 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Hoxc9P09633 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxc9P09633 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Hoxc9P09633 Gm43621-201ENSMUST00000202733 2022 ntBASIC9.19□□□□□ -0.94
Hoxc9P09633 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxc9P09633 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Hoxc9P09633 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxc9P09633 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxc9P09633 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Hoxc9P09633 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxc9P09633 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Hoxc9P09633 Gm12369-201ENSMUST00000121343 942 ntBASIC9.19□□□□□ -0.94
Hoxc9P09633 Gm12101-201ENSMUST00000121590 390 ntBASIC9.19□□□□□ -0.94
Hoxc9P09633 Gm8183-201ENSMUST00000183134 980 ntBASIC9.19□□□□□ -0.94
Hoxc9P09633 Gm21301-201ENSMUST00000189476 699 ntBASIC9.19□□□□□ -0.94
Hoxc9P09633 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxc9P09633 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxc9P09633 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxc9P09633 Gm7413-201ENSMUST00000219498 462 ntBASIC9.19□□□□□ -0.94
Hoxc9P09633 AC154806.5-204ENSMUST00000228900 867 ntBASIC9.19□□□□□ -0.94
Hoxc9P09633 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Hoxc9P09633 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC9.19□□□□□ -0.94
Hoxc9P09633 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxc9P09633 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxc9P09633 Gm11590-201ENSMUST00000118999 1455 ntBASIC9.19□□□□□ -0.94
Hoxc9P09633 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC9.19□□□□□ -0.94
Hoxc9P09633 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxc9P09633 Gm37595-201ENSMUST00000192668 1742 ntBASIC9.19□□□□□ -0.94
Hoxc9P09633 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxc9P09633 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxc9P09633 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
Hoxc9P09633 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxc9P09633 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms