Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm22434-201ENSMUST00000158549 122 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm23195-201ENSMUST00000158814 129 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm3111-201ENSMUST00000167426 490 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Btnl5-ps-202ENSMUST00000173333 461 ntTSL 2 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm5350-201ENSMUST00000182057 1002 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm21392-201ENSMUST00000182950 972 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm27150-201ENSMUST00000183441 1038 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm27228-201ENSMUST00000184500 1038 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm7863-201ENSMUST00000184700 805 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm29216-201ENSMUST00000187117 492 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm18697-201ENSMUST00000191179 2126 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm37353-201ENSMUST00000194497 313 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm42628-201ENSMUST00000198498 764 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm42654-201ENSMUST00000200789 494 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Olfr1396-203ENSMUST00000203007 981 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm44718-201ENSMUST00000206886 359 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC6.72□□□□□ -1.33
Hoxd3P09027 AC073947.3-201ENSMUST00000215576 766 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm5055-201ENSMUST00000215697 581 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 AC151843.1-201ENSMUST00000215960 691 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Anapc15-ps-202ENSMUST00000218771 399 ntAPPRIS P5 BASIC6.72□□□□□ -1.33
Hoxd3P09027 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC6.72□□□□□ -1.33
Hoxd3P09027 AC118250.2-201ENSMUST00000228890 416 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Svs3b-201ENSMUST00000063132 1249 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gstp3-201ENSMUST00000076451 685 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Olfr45-201ENSMUST00000084454 1035 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Hoxd3P09027 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm13100-201ENSMUST00000117157 1439 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Naa20-204ENSMUST00000134759 1883 ntTSL 2 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm5315-201ENSMUST00000204430 1897 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Pcdhb8-201ENSMUST00000051163 3334 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm11548-201ENSMUST00000140203 2199 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 AC122402.1-201ENSMUST00000225199 2303 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Trim42-201ENSMUST00000035026 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Ak7-201ENSMUST00000040876 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Zc3h3-201ENSMUST00000100538 3360 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gzmk-202ENSMUST00000122399 1304 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Teddm1a-201ENSMUST00000050660 1317 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Coro7-201ENSMUST00000038552 4296 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Prkar2b-203ENSMUST00000146865 3133 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxd3P09027 Rfx3-208ENSMUST00000174850 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxd3P09027 4932438H23Rik-202ENSMUST00000114076 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxd3P09027 Gabpb2-203ENSMUST00000107204 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxd3P09027 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.71□□□□□ -1.33
Hoxd3P09027 Mgat4e-201ENSMUST00000052911 1360 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Hoxd3P09027 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxd3P09027 Gpbp1-201ENSMUST00000047627 3694 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxd3P09027 Prkar1a-203ENSMUST00000106677 3513 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Hoxd3P09027 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxd3P09027 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Hoxd3P09027 Atp2c1-212ENSMUST00000176770 2781 ntTSL 5 BASIC6.71□□□□□ -1.33
Hoxd3P09027 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Hoxd3P09027 Ints10-202ENSMUST00000070713 4192 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxd3P09027 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxd3P09027 Dhx30-204ENSMUST00000196171 3885 ntTSL 5 BASIC6.71□□□□□ -1.33
Hoxd3P09027 Gm15128-201ENSMUST00000112814 2027 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxd3P09027 Gm36401-201ENSMUST00000194255 2028 ntBASIC6.71□□□□□ -1.33
Hoxd3P09027 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 D030007L05Rik-201ENSMUST00000222964 1871 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Hdhd2-207ENSMUST00000147332 1705 ntTSL 5 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Olfr214-205ENSMUST00000217313 2802 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Fam198a-201ENSMUST00000043011 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Il1f5-202ENSMUST00000114490 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm15095-201ENSMUST00000118996 1430 ntBASIC6.71□□□□□ -1.34
Hoxd3P09027 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Lrrc71-201ENSMUST00000023846 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Olfr353-201ENSMUST00000100149 936 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Hoxd3P09027 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxd3P09027 Gm22591-201ENSMUST00000104243 106 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms