Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm8177-201ENSMUST00000181591 1336 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Pbrm1-204ENSMUST00000090214 6212 ntTSL 5 BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm12842-201ENSMUST00000117298 476 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm16557-201ENSMUST00000159182 191 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm17217-201ENSMUST00000166613 469 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm27348-201ENSMUST00000184511 170 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm43089-201ENSMUST00000199162 275 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.24
Col4a6B1AVK5 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Col4a6B1AVK5 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
Col4a6B1AVK5 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm44669-201ENSMUST00000207774 1969 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gon4l-201ENSMUST00000081695 7440 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gon4l-202ENSMUST00000090942 7443 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm11271-201ENSMUST00000116054 440 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm14018-201ENSMUST00000119042 455 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm25722-201ENSMUST00000157498 279 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm22262-201ENSMUST00000158713 86 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm27507-201ENSMUST00000184199 93 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm27601-201ENSMUST00000184794 127 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Mir7674-201ENSMUST00000184964 63 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm28527-201ENSMUST00000185210 297 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm5154-201ENSMUST00000203971 399 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm5055-201ENSMUST00000215697 581 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Arhgef9-207ENSMUST00000113885 4578 ntTSL 5 BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm15575-201ENSMUST00000119414 1581 ntBASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Col4a6B1AVK5 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC7.26□□□□□ -1.25
Col4a6B1AVK5 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a6B1AVK5 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a6B1AVK5 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a6B1AVK5 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.26□□□□□ -1.25
Col4a6B1AVK5 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a6B1AVK5 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a6B1AVK5 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Col4a6B1AVK5 Gm14733-201ENSMUST00000117680 133 ntBASIC7.26□□□□□ -1.25
Col4a6B1AVK5 Gm12135-201ENSMUST00000119170 466 ntBASIC7.26□□□□□ -1.25
Col4a6B1AVK5 Gm24687-201ENSMUST00000157758 241 ntBASIC7.26□□□□□ -1.25
Col4a6B1AVK5 Gm22701-201ENSMUST00000175371 291 ntBASIC7.26□□□□□ -1.25
Col4a6B1AVK5 Gm5694-201ENSMUST00000195648 641 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms