Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Gm44669-201ENSMUST00000207774 1969 ntBASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Gm23756-201ENSMUST00000157582 114 ntBASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Gm44342-201ENSMUST00000196874 129 ntBASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Gm44383-201ENSMUST00000198940 129 ntBASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm23810-201ENSMUST00000175150 74 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm37439-201ENSMUST00000193150 856 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm9504-201ENSMUST00000196322 468 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm37663-201ENSMUST00000191887 2299 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm14865-201ENSMUST00000117523 494 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm12804-201ENSMUST00000121030 999 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm6451-201ENSMUST00000121488 717 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm3810-201ENSMUST00000122413 476 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm27152-201ENSMUST00000183828 99 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm27972-201ENSMUST00000184720 137 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm43725-201ENSMUST00000200122 369 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm42673-201ENSMUST00000202676 337 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm44411-201ENSMUST00000204172 349 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm38840-201ENSMUST00000204716 843 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Gm44896-201ENSMUST00000206190 772 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 AC160114.2-201ENSMUST00000223021 300 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 CT030238.4-202ENSMUST00000226143 745 ntBASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
Scn3aA2ASI5 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Gm10513-201ENSMUST00000194203 6468 ntBASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Gm5970-201ENSMUST00000131638 1216 ntBASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Gm25435-201ENSMUST00000158277 267 ntBASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Gm42708-201ENSMUST00000196332 905 ntBASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Gm45739-201ENSMUST00000213094 388 ntBASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Gm7252-201ENSMUST00000223284 456 ntBASIC7.87□□□□□ -1.15
Scn3aA2ASI5 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Gm45537-201ENSMUST00000211539 2708 ntBASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Scn3aA2ASI5 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms