Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm10601-201ENSMUST00000120436 1422 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm14201-201ENSMUST00000117627 289 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm15778-201ENSMUST00000118469 608 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm24139-201ENSMUST00000122780 288 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm22035-201ENSMUST00000157284 228 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm28195-201ENSMUST00000186992 372 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm18699-201ENSMUST00000190713 243 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm35108-201ENSMUST00000194321 699 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm33191-201ENSMUST00000195604 699 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 AC132590.1-201ENSMUST00000224374 1164 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 AC158981.1-201ENSMUST00000226943 1205 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm37163-201ENSMUST00000195439 1690 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Gm6350-201ENSMUST00000195099 1339 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.76□□□□□ -1.33
Trim3Q9R1R2 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm15422-201ENSMUST00000117453 541 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm15576-201ENSMUST00000117806 583 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm11865-201ENSMUST00000118093 859 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm5255-201ENSMUST00000120125 642 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm13282-201ENSMUST00000121577 545 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm23639-201ENSMUST00000175078 132 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Ighv1-17-201ENSMUST00000194435 350 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm43555-201ENSMUST00000196588 310 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm2505-201ENSMUST00000200413 825 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm34583-203ENSMUST00000202586 454 ntBASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.75□□□□□ -1.33
Trim3Q9R1R2 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms