Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chmp4bQ9D8B3 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chmp4bQ9D8B3 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Chmp4bQ9D8B3 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chmp4bQ9D8B3 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Chmp4bQ9D8B3 Gm44130-201ENSMUST00000205157 3004 ntBASIC9.02□□□□□ -0.96
Chmp4bQ9D8B3 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Chmp4bQ9D8B3 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Chmp4bQ9D8B3 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm14373-201ENSMUST00000122467 2158 ntBASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm45061-201ENSMUST00000204395 2095 ntBASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm14727-201ENSMUST00000118526 525 ntBASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm14721-201ENSMUST00000121381 525 ntBASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm2735-201ENSMUST00000136133 277 ntBASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm3208-201ENSMUST00000168281 427 ntBASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm38079-201ENSMUST00000195603 154 ntBASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm7394-201ENSMUST00000209138 1032 ntBASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 CT025639.2-201ENSMUST00000224440 1220 ntBASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Amy2b-201ENSMUST00000120184 1577 ntBASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Chmp4bQ9D8B3 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Gm24986-201ENSMUST00000104452 132 ntBASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Gm15054-201ENSMUST00000117393 281 ntBASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Gm12740-201ENSMUST00000118794 308 ntBASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Gm43926-201ENSMUST00000203978 430 ntBASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Gm44971-201ENSMUST00000206192 337 ntBASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 CT030166.4-201ENSMUST00000220640 404 ntBASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Gm9315-201ENSMUST00000222696 908 ntBASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 AV026068-219ENSMUST00000224148 933 ntBASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 AV026068-229ENSMUST00000225516 595 ntBASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Gm44186-201ENSMUST00000204118 2752 ntBASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Gm44093-201ENSMUST00000204381 1802 ntBASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Chmp4bQ9D8B3 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Chmp4bQ9D8B3 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Gm8812-201ENSMUST00000118496 412 ntBASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Gm12321-201ENSMUST00000121485 804 ntBASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Gm25770-201ENSMUST00000158566 115 ntBASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Gm5147-201ENSMUST00000185999 794 ntBASIC9□□□□□ -0.97
Chmp4bQ9D8B3 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms