Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm44185-201ENSMUST00000204539 3307 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm45358-201ENSMUST00000209492 2305 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 CT009711.1-201ENSMUST00000223992 3040 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm13313-201ENSMUST00000118938 1084 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm13525-201ENSMUST00000120607 478 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm12535-201ENSMUST00000121025 484 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm16523-201ENSMUST00000121253 592 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm2976-201ENSMUST00000160362 513 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm6472-202ENSMUST00000187973 582 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm43555-201ENSMUST00000196588 310 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm43906-201ENSMUST00000203194 906 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 AC118249.1-201ENSMUST00000224822 608 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 AC154640.3-201ENSMUST00000227492 846 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 AC102676.1-201ENSMUST00000228131 719 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm10108-201ENSMUST00000078246 319 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm6887-201ENSMUST00000080945 482 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 AC122346.1-201ENSMUST00000225266 3732 ntBASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Smc1aQ9CU62 Gm45793-201ENSMUST00000207900 1342 ntBASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm6558-201ENSMUST00000191934 1973 ntBASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm43606-201ENSMUST00000195938 3556 ntBASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm20491-201ENSMUST00000173765 1241 ntBASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm18875-201ENSMUST00000188563 882 ntBASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm5305-201ENSMUST00000204010 746 ntBASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Gm44441-201ENSMUST00000203642 2475 ntBASIC8.04□□□□□ -1.12
Smc1aQ9CU62 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Smc1aQ9CU62 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms