Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.39□□□□□ -1.23
Ccdc28aQ8CEI3 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc28aQ8CEI3 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc28aQ8CEI3 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc28aQ8CEI3 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Ccdc28aQ8CEI3 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.39□□□□□ -1.23
Ccdc28aQ8CEI3 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc28aQ8CEI3 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
Ccdc28aQ8CEI3 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc28aQ8CEI3 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.39□□□□□ -1.23
Ccdc28aQ8CEI3 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
Ccdc28aQ8CEI3 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm37940-201ENSMUST00000194243 3251 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm25167-201ENSMUST00000104188 120 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm6491-201ENSMUST00000118273 990 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm13930-201ENSMUST00000118569 368 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm12630-201ENSMUST00000121575 784 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm15501-202ENSMUST00000140687 625 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Mir6409-201ENSMUST00000184957 92 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm6236-201ENSMUST00000193785 1009 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 AC137678.1-201ENSMUST00000198370 118 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm46231-201ENSMUST00000220152 314 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 AV026068-219ENSMUST00000224148 933 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 AC132590.1-201ENSMUST00000224374 1164 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Snora21-201ENSMUST00000082967 137 ntBASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc28aQ8CEI3 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm5759-201ENSMUST00000119203 811 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm11258-201ENSMUST00000121086 1218 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm22552-201ENSMUST00000157796 337 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm23220-201ENSMUST00000158115 137 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm6061-201ENSMUST00000175860 492 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm37724-201ENSMUST00000195240 1221 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm43656-201ENSMUST00000197882 434 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm43226-201ENSMUST00000202438 259 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Gm8077-201ENSMUST00000209221 1024 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 AC117949.1-201ENSMUST00000225547 419 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 CT009556.4-201ENSMUST00000227092 200 ntBASIC7.37□□□□□ -1.23
Ccdc28aQ8CEI3 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms