Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.29□□□□□ -1.24
Trub1Q8C0D0 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Trub1Q8C0D0 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Trub1Q8C0D0 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Trub1Q8C0D0 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trub1Q8C0D0 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Trub1Q8C0D0 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trub1Q8C0D0 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.29□□□□□ -1.24
Trub1Q8C0D0 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Mir697-201ENSMUST00000102316 109 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm12306-201ENSMUST00000117256 171 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm15054-201ENSMUST00000117393 281 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm11926-201ENSMUST00000118520 430 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm23276-201ENSMUST00000157913 138 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm5656-201ENSMUST00000171020 1096 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm4373-201ENSMUST00000178571 556 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Pea15b-201ENSMUST00000182806 387 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm27026-201ENSMUST00000183003 892 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm27684-201ENSMUST00000183778 80 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm18428-201ENSMUST00000194986 791 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm44722-201ENSMUST00000206473 436 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm46231-201ENSMUST00000220152 314 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm10388-201ENSMUST00000205001 2936 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.28□□□□□ -1.24
Trub1Q8C0D0 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Trub1Q8C0D0 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Trub1Q8C0D0 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.24
Trub1Q8C0D0 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.27□□□□□ -1.24
Trub1Q8C0D0 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.27□□□□□ -1.24
Trub1Q8C0D0 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm23437-201ENSMUST00000104036 127 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm7091-201ENSMUST00000116438 586 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm14201-201ENSMUST00000117627 289 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm13798-201ENSMUST00000118285 139 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm13196-201ENSMUST00000118297 379 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm4785-201ENSMUST00000191025 751 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm42938-201ENSMUST00000198414 1072 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm43040-201ENSMUST00000202399 558 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm6667-201ENSMUST00000217169 564 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm9315-201ENSMUST00000222696 908 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms