Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 AC122263.1-201ENSMUST00000228636 2805 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm11282-201ENSMUST00000119018 1416 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm23323-201ENSMUST00000104471 133 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm12306-201ENSMUST00000117256 171 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm15054-201ENSMUST00000117393 281 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm8812-201ENSMUST00000118496 412 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm11320-201ENSMUST00000119434 463 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm14787-201ENSMUST00000121236 388 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm14251-201ENSMUST00000122133 279 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm4613-201ENSMUST00000165488 276 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm7426-201ENSMUST00000179046 404 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm29357-201ENSMUST00000186877 698 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm28416-201ENSMUST00000188334 292 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm8925-201ENSMUST00000197212 763 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm44943-201ENSMUST00000207254 300 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm45506-201ENSMUST00000211620 280 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm4780-201ENSMUST00000213206 1242 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm5119-201ENSMUST00000215858 634 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm26130-201ENSMUST00000083171 138 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim43aQ3TL54 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm6491-201ENSMUST00000118273 990 ntBASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm14016-201ENSMUST00000119095 486 ntBASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm11850-201ENSMUST00000119679 479 ntBASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm14053-201ENSMUST00000121662 470 ntBASIC7.53□□□□□ -1.2
Trim43aQ3TL54 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm2709-201ENSMUST00000142979 350 ntBASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm27019-201ENSMUST00000183056 404 ntBASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Gm28413-201ENSMUST00000189369 291 ntBASIC7.53□□□□□ -1.2
Trim43aQ3TL54 Ighv1-17-201ENSMUST00000194435 350 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms