Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm24530-201ENSMUST00000157948 288 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm26455-201ENSMUST00000175300 92 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm5946-201ENSMUST00000182340 970 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm29509-201ENSMUST00000185716 321 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm8506-201ENSMUST00000186661 829 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm5511-201ENSMUST00000189380 802 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm37741-201ENSMUST00000191768 1256 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm37054-201ENSMUST00000193481 543 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm17530-201ENSMUST00000194336 472 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm6321-201ENSMUST00000194460 1090 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm37989-201ENSMUST00000195202 803 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm43558-201ENSMUST00000200155 210 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm44279-201ENSMUST00000205154 472 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm44690-201ENSMUST00000207984 382 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.6□□□□□ -1.35
Col8a1Q00780 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC6.6□□□□□ -1.35
Col8a1Q00780 CT025639.2-201ENSMUST00000224440 1220 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 AC165281.1-201ENSMUST00000225713 1011 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Baalc-201ENSMUST00000163313 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm42759-201ENSMUST00000195915 2439 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Tlr5-201ENSMUST00000110997 3199 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Ptchd1-201ENSMUST00000038665 2768 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm8995-202ENSMUST00000208417 3490 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Smpd4-209ENSMUST00000165363 3046 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Hnrnph2-204ENSMUST00000113202 3988 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Ephx2-202ENSMUST00000224698 1985 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm44802-201ENSMUST00000208026 1916 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm11358-201ENSMUST00000122310 373 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm26321-201ENSMUST00000157740 242 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm4831-201ENSMUST00000174626 594 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm19480-201ENSMUST00000185547 667 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm38214-201ENSMUST00000192581 988 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm38330-201ENSMUST00000192743 959 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm37993-201ENSMUST00000195301 988 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm42857-201ENSMUST00000200823 339 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm3549-201ENSMUST00000203873 794 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm18839-201ENSMUST00000204292 670 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm44138-201ENSMUST00000204939 271 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm44856-201ENSMUST00000206639 304 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms