Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nphp4P59240 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nphp4P59240 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC9.6□□□□□ -0.87
Nphp4P59240 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nphp4P59240 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC9.6□□□□□ -0.87
Nphp4P59240 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nphp4P59240 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nphp4P59240 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Nphp4P59240 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Nphp4P59240 Gm12713-201ENSMUST00000118404 764 ntBASIC9.6□□□□□ -0.87
Nphp4P59240 Gm5843-201ENSMUST00000121631 476 ntBASIC9.6□□□□□ -0.87
Nphp4P59240 Gm23968-201ENSMUST00000175047 125 ntBASIC9.6□□□□□ -0.87
Nphp4P59240 Gm43141-201ENSMUST00000199695 274 ntBASIC9.6□□□□□ -0.87
Nphp4P59240 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC9.6□□□□□ -0.87
Nphp4P59240 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nphp4P59240 Gm7351-201ENSMUST00000210745 580 ntBASIC9.6□□□□□ -0.87
Nphp4P59240 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nphp4P59240 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC9.6□□□□□ -0.87
Nphp4P59240 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC9.6□□□□□ -0.87
Nphp4P59240 AL713985.1-201ENSMUST00000219030 420 ntBASIC9.6□□□□□ -0.87
Nphp4P59240 Gm9315-201ENSMUST00000222696 908 ntBASIC9.6□□□□□ -0.87
Nphp4P59240 AC163684.1-201ENSMUST00000223766 927 ntBASIC9.6□□□□□ -0.87
Nphp4P59240 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nphp4P59240 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nphp4P59240 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nphp4P59240 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC9.6□□□□□ -0.87
Nphp4P59240 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nphp4P59240 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nphp4P59240 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nphp4P59240 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nphp4P59240 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Nphp4P59240 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Nphp4P59240 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC9.59□□□□□ -0.87
Nphp4P59240 Gm13301-201ENSMUST00000121728 2446 ntBASIC9.59□□□□□ -0.87
Nphp4P59240 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC9.59□□□□□ -0.87
Nphp4P59240 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Gm23756-201ENSMUST00000157582 114 ntBASIC9.59□□□□□ -0.87
Nphp4P59240 Gm5871-201ENSMUST00000176461 718 ntBASIC9.59□□□□□ -0.87
Nphp4P59240 Gm9285-201ENSMUST00000177691 697 ntBASIC9.59□□□□□ -0.87
Nphp4P59240 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC9.59□□□□□ -0.87
Nphp4P59240 Gm17895-201ENSMUST00000194028 874 ntBASIC9.59□□□□□ -0.87
Nphp4P59240 Gm42708-201ENSMUST00000196332 905 ntBASIC9.59□□□□□ -0.87
Nphp4P59240 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 AC154904.1-201ENSMUST00000219510 312 ntBASIC9.59□□□□□ -0.87
Nphp4P59240 AC174678.3-201ENSMUST00000227568 362 ntBASIC9.59□□□□□ -0.87
Nphp4P59240 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Nphp4P59240 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC9.59□□□□□ -0.87
Nphp4P59240 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Gm44121-201ENSMUST00000205169 2006 ntBASIC9.59□□□□□ -0.87
Nphp4P59240 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Gm37138-201ENSMUST00000194564 2089 ntBASIC9.59□□□□□ -0.87
Nphp4P59240 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC9.59□□□□□ -0.87
Nphp4P59240 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nphp4P59240 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nphp4P59240 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nphp4P59240 Gm13006-201ENSMUST00000118683 214 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 Gm14896-201ENSMUST00000121311 1351 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 Gm11581-201ENSMUST00000122024 763 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC9.58□□□□□ -0.88
Nphp4P59240 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC9.58□□□□□ -0.88
Nphp4P59240 Gm15681-201ENSMUST00000137501 2704 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Nphp4P59240 Gm8192-201ENSMUST00000182196 958 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC9.58□□□□□ -0.88
Nphp4P59240 Gm28413-201ENSMUST00000189369 291 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nphp4P59240 AC122844.1-201ENSMUST00000195971 107 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 Gm9504-201ENSMUST00000196322 468 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Nphp4P59240 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nphp4P59240 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC9.58□□□□□ -0.88
Nphp4P59240 Gm9231-201ENSMUST00000220817 1009 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 AC154558.1-201ENSMUST00000222278 415 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 AC155234.1-201ENSMUST00000225610 2823 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 AC159267.1-201ENSMUST00000226702 678 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 AC167013.4-201ENSMUST00000226712 317 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nphp4P59240 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nphp4P59240 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nphp4P59240 n-R5s95-201ENSMUST00000082684 118 ntBASIC9.58□□□□□ -0.88
Nphp4P59240 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Nphp4P59240 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Nphp4P59240 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms