Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
Sox1P53783 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC7.97□□□□□ -1.13
Sox1P53783 Gm34730-201ENSMUST00000210674 4077 ntTSL 5 BASIC7.97□□□□□ -1.13
Sox1P53783 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Fut10-203ENSMUST00000161502 3527 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Snhg7os-202ENSMUST00000131841 3947 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Gm31983-202ENSMUST00000210553 3155 ntTSL 5 BASIC7.97□□□□□ -1.13
Sox1P53783 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Vmn2r53-201ENSMUST00000170412 2421 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Sox1P53783 Gm14610-201ENSMUST00000118358 966 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm12477-201ENSMUST00000121221 571 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm14623-201ENSMUST00000121398 603 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm13673-201ENSMUST00000122056 531 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.97□□□□□ -1.13
Sox1P53783 Gm14747-201ENSMUST00000149888 984 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm23467-201ENSMUST00000157127 159 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm17043-201ENSMUST00000164621 1283 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Sox1P53783 Gm23139-201ENSMUST00000179454 132 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Gm8498-201ENSMUST00000188227 974 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm38166-201ENSMUST00000191660 471 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm34768-201ENSMUST00000193884 565 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm38079-201ENSMUST00000195603 154 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC7.97□□□□□ -1.13
Sox1P53783 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Gm44987-201ENSMUST00000206578 750 ntTSL 3 BASIC7.97□□□□□ -1.13
Sox1P53783 Gm19201-201ENSMUST00000210127 778 ntBASIC7.97□□□□□ -1.13
Sox1P53783 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm18387-201ENSMUST00000220333 702 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm7119-201ENSMUST00000221345 695 ntBASIC7.97□□□□□ -1.13
Sox1P53783 AC154636.3-201ENSMUST00000221489 1214 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC7.97□□□□□ -1.13
Sox1P53783 AC163667.2-201ENSMUST00000223769 791 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC7.97□□□□□ -1.13
Sox1P53783 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Sox1P53783 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.97□□□□□ -1.13
Sox1P53783 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Sox1P53783 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Sox1P53783 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Tigar-201ENSMUST00000039913 3651 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 A730065G17Rik-201ENSMUST00000217082 3335 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 AC122346.1-202ENSMUST00000225586 2116 ntBASIC7.97□□□□□ -1.13
Sox1P53783 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 AC122397.1-201ENSMUST00000228650 2819 ntBASIC7.97□□□□□ -1.13
Sox1P53783 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Sox1P53783 Gm37649-201ENSMUST00000192079 2232 ntBASIC7.97□□□□□ -1.13
Sox1P53783 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Sox1P53783 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Sox1P53783 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Sox1P53783 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Sox1P53783 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Sox1P53783 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Sox1P53783 Gja10-202ENSMUST00000219644 1857 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Sox1P53783 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC7.96□□□□□ -1.13
Sox1P53783 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Sox1P53783 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Sox1P53783 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Sox1P53783 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Sox1P53783 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Sox1P53783 Rpap3-ps2-201ENSMUST00000184741 2161 ntBASIC7.96□□□□□ -1.14
Sox1P53783 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Sox1P53783 Cd68-202ENSMUST00000108654 1008 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
Sox1P53783 Gm16007-201ENSMUST00000117837 286 ntBASIC7.96□□□□□ -1.14
Sox1P53783 Gm16411-201ENSMUST00000122164 1100 ntBASIC7.96□□□□□ -1.14
Sox1P53783 Gm15077-201ENSMUST00000122344 362 ntBASIC7.96□□□□□ -1.14
Sox1P53783 Gm8837-201ENSMUST00000161037 1107 ntBASIC7.96□□□□□ -1.14
Sox1P53783 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.96□□□□□ -1.14
Sox1P53783 Gm5698-201ENSMUST00000178317 724 ntBASIC7.96□□□□□ -1.14
Sox1P53783 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC7.96□□□□□ -1.14
Sox1P53783 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Sox1P53783 Gm44234-201ENSMUST00000204246 900 ntBASIC7.96□□□□□ -1.14
Sox1P53783 Gm44538-201ENSMUST00000205615 348 ntBASIC7.96□□□□□ -1.14
Sox1P53783 Olfr362-203ENSMUST00000215927 1210 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
Sox1P53783 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.96□□□□□ -1.14
Sox1P53783 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
Sox1P53783 Olfr815-201ENSMUST00000071557 951 ntBASIC7.96□□□□□ -1.14
Sox1P53783 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Sox1P53783 Gm16433-201ENSMUST00000062429 1984 ntBASIC7.96□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms