Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm26557-201ENSMUST00000180756 493 ntBASIC7.99□□□□□ -1.13
Brca1P48754 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC7.99□□□□□ -1.13
Brca1P48754 Gm18699-201ENSMUST00000190713 243 ntBASIC7.99□□□□□ -1.13
Brca1P48754 Gm43392-201ENSMUST00000196560 434 ntBASIC7.99□□□□□ -1.13
Brca1P48754 Gm43867-201ENSMUST00000203860 525 ntBASIC7.99□□□□□ -1.13
Brca1P48754 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Brca1P48754 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Brca1P48754 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Brca1P48754 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
Brca1P48754 Gm42930-201ENSMUST00000200872 3260 ntBASIC7.99□□□□□ -1.13
Brca1P48754 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Brca1P48754 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC7.99□□□□□ -1.13
Brca1P48754 Ank2-201ENSMUST00000044443 5775 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Brca1P48754 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Brca1P48754 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Brca1P48754 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Brca1P48754 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Brca1P48754 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Brca1P48754 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Brca1P48754 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Brca1P48754 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Brca1P48754 Gm27018-201ENSMUST00000181136 225 ntBASIC7.99□□□□□ -1.13
Brca1P48754 Gm6931-201ENSMUST00000183103 371 ntBASIC7.99□□□□□ -1.13
Brca1P48754 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.99□□□□□ -1.13
Brca1P48754 Gm43233-201ENSMUST00000200491 616 ntBASIC7.99□□□□□ -1.13
Brca1P48754 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Brca1P48754 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 Gm37496-201ENSMUST00000191930 2509 ntBASIC7.98□□□□□ -1.13
Brca1P48754 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC7.98□□□□□ -1.13
Brca1P48754 Tmem161b-206ENSMUST00000225069 2414 ntBASIC7.98□□□□□ -1.13
Brca1P48754 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.98□□□□□ -1.13
Brca1P48754 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 Gm14865-201ENSMUST00000117523 494 ntBASIC7.98□□□□□ -1.13
Brca1P48754 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC7.98□□□□□ -1.13
Brca1P48754 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.98□□□□□ -1.13
Brca1P48754 Gm21542-201ENSMUST00000182307 993 ntBASIC7.98□□□□□ -1.13
Brca1P48754 Gm5260-201ENSMUST00000186157 949 ntBASIC7.98□□□□□ -1.13
Brca1P48754 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.98□□□□□ -1.13
Brca1P48754 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 AW822073-201ENSMUST00000075305 555 ntBASIC7.98□□□□□ -1.13
Brca1P48754 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Brca1P48754 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Brca1P48754 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Brca1P48754 AC123832.1-201ENSMUST00000214120 2371 ntBASIC7.98□□□□□ -1.13
Brca1P48754 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Brca1P48754 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.98□□□□□ -1.13
Brca1P48754 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Brca1P48754 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC7.98□□□□□ -1.13
Brca1P48754 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
Brca1P48754 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brca1P48754 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.97□□□□□ -1.13
Brca1P48754 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.97□□□□□ -1.13
Brca1P48754 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.97□□□□□ -1.13
Brca1P48754 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Lrrc15-201ENSMUST00000064606 5310 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Gm3810-201ENSMUST00000122413 476 ntBASIC7.97□□□□□ -1.13
Brca1P48754 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.97□□□□□ -1.13
Brca1P48754 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Brca1P48754 Gm20620-201ENSMUST00000177528 168 ntBASIC7.97□□□□□ -1.13
Brca1P48754 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Gm37322-201ENSMUST00000193409 337 ntBASIC7.97□□□□□ -1.13
Brca1P48754 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC7.97□□□□□ -1.13
Brca1P48754 Gm8058-201ENSMUST00000217247 587 ntBASIC7.97□□□□□ -1.13
Brca1P48754 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.97□□□□□ -1.13
Brca1P48754 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.97□□□□□ -1.13
Brca1P48754 Gm43970-201ENSMUST00000204346 3605 ntBASIC7.97□□□□□ -1.13
Brca1P48754 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Gm44101-201ENSMUST00000203951 2221 ntBASIC7.97□□□□□ -1.13
Brca1P48754 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC7.97□□□□□ -1.13
Brca1P48754 Gm44950-201ENSMUST00000206403 2296 ntBASIC7.97□□□□□ -1.13
Brca1P48754 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Brca1P48754 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Brca1P48754 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brca1P48754 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 182.1 ms