Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC6.44□□□□□ -1.38
Rfx3P48381 Gm13545-201ENSMUST00000119044 482 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 Gm14016-201ENSMUST00000119095 486 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 Gm11928-201ENSMUST00000119323 437 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 Gm15586-201ENSMUST00000121218 528 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.44□□□□□ -1.38
Rfx3P48381 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC6.44□□□□□ -1.38
Rfx3P48381 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.44□□□□□ -1.38
Rfx3P48381 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.44□□□□□ -1.38
Rfx3P48381 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.44□□□□□ -1.38
Rfx3P48381 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Rfx3P48381 Gm20797-201ENSMUST00000177894 383 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 Gm26729-201ENSMUST00000180744 352 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 Gm29435-201ENSMUST00000191310 689 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 Gm38305-201ENSMUST00000194825 223 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Rfx3P48381 Gm43108-201ENSMUST00000200525 293 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 Gm43226-201ENSMUST00000202438 259 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 Gm44380-201ENSMUST00000203125 293 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC6.44□□□□□ -1.38
Rfx3P48381 CT009738.1-201ENSMUST00000219031 809 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 A1cf-203ENSMUST00000224400 1204 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.44□□□□□ -1.38
Rfx3P48381 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Gm38263-201ENSMUST00000195879 3059 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.44□□□□□ -1.38
Rfx3P48381 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
Rfx3P48381 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx3P48381 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.44□□□□□ -1.38
Rfx3P48381 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
Rfx3P48381 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Rfx3P48381 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
Rfx3P48381 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Rfx3P48381 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Rfx3P48381 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Rfx3P48381 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 Gm25276-201ENSMUST00000104300 124 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Gm6428-201ENSMUST00000161062 345 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.43□□□□□ -1.38
Rfx3P48381 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Rfx3P48381 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Rfx3P48381 Gm27458-201ENSMUST00000185108 121 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 Gm37295-201ENSMUST00000192186 109 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC6.43□□□□□ -1.38
Rfx3P48381 Gm18752-201ENSMUST00000192876 608 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Gm37225-201ENSMUST00000193423 325 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.43□□□□□ -1.38
Rfx3P48381 Gm44566-201ENSMUST00000207638 304 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Gm45446-201ENSMUST00000209348 216 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Gm6885-201ENSMUST00000217261 372 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC6.43□□□□□ -1.38
Rfx3P48381 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.43□□□□□ -1.38
Rfx3P48381 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC6.43□□□□□ -1.38
Rfx3P48381 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Rfx3P48381 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.43□□□□□ -1.38
Rfx3P48381 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx3P48381 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Rfx3P48381 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms